LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva09g01240	ATGGCTTCTTCTACTCTTCATTTCAATtctctgcttctgcttctggtTCTTCCCCACCTTCCAACTGTATTTACCATTAAAAATTCAGACACTCAGATAGAGCTGAATTTATCTCTACCTACAGGTCATTCATGGAATTCATTATCTAATGAATTTGCCTTTGGTTTACGAAACGTTCAACTTGGTGAGCAAAGAAAAGTTTCCCTGCTTGCCATTTGGTTCACCAAAGATGTCAATCAAACCATAGTTTGGTTTTCGAGAGATGCTGCAGGCTCGACAGTGAACCTGAACAACAAAGGAGTAGCAGTGTATGACCAACAAGGCGATCAAATATGGCGTCGACCAAATCCTGAAAGTAATGAAACATCTTATGCCACTATGCAAGATAATGGAAACTTTGTGCTTCATGATAAGGATGGTAATCATCTATGGGAGAGTTTTCAAGAGCCCACTGATACAATTTTGCCTGGCCAGAAGCTAAATTTGACTAAGGTGGCGGAACTCAGAGCTCGCAAATCTGAGACTGATTTTTCTGAGGGCGATTTCGGGTTCCATTGCCAAGATGGTGGCAACTTGTTGCTTTACTATATTCCAGAAAGAGTGGATTACTGGGATGGTAGAACATTGAATAGTAATGCTGATATGCAGCTTTTCTTCAATGAATCTGGAGAAATTTCCATCAGAAATCAGAGTTATAAAATGATCATCACGAAGGGAGACCCAGATTCACAAGAATACAGAAATTACATGGCTAGAATTGATTCTGATGGAGGTTTCAGATTATACCAGAGGAGTCGTAGCTGTGATACAAGATTTCAATGGGAGGAACAGGAAACTTTTCCTCCTGGTTATGATATTTGCTTCACCTTCTTGACAAGTGTTGGAGGTGTTTTTTGTGGTTTAAACAGCTATTGTGAAGTTATGGACAAAAAGCCTCAATGCTCCTGCGTAGATGGTTATTCTTTTGTTGACCGCAAAAGTTGCAGACCAAATTTTCCACTACCCAGTTGCCAGGAAGATggatgggaaaagaaaaaacagcaTGTGCAAATAAATGAGTATATTAACATAGATTGGCCTTTGTCTGACTATGATTATCAGATGAATAATACAACCGACAAGGATTATTGTCGACAACAATGCCTTGATGATTGTTTTTGTGCAGTAGCCATTTACACAGATGGACGTTGTTGGAGGAAGAGGTTCCCTTTGAGCAATGGAAGGAAAGGCCAAAGTGTCAACAGAATAGCATTAGTCAAGGTTCCAACACCTGAAGCTTTAGCTAATCTGAAGATGAAGACTACTACCAAAACAGAGACAAATAAAGATCAGTCCACCCTAGTGCTTGTTATATCAATACTGCTTGGGAGCTCTGTGTTCTTCAATATCCTTCTATTGGCTGGTTCTTTTGTGGCATTTTCCATCTTGTACCATAGGAAGCTAGTTAATTTGCAGCAAGTTTCAAGCTTGTCTGCAGCAACTGTGAGAAGATTTACATACAAGGAGCTTGAAGAAGCAACTAGAGGCTTCCAACAAACACTGGGTCGAGGCGCTTTTGGAACAGTTTACAAAGGCGTATTAGCATCAGATACCACAAGATATGTTGCTGTTAAGAAATTAGACAAGGTAGTGCAAGAAGGTGAGAAGGAATTCAAAACAGAAGTGAGTGTGATCGGCCAAACCCACCACAGAAATTTGGTCAGGTTGCTTGGTTACTGTGATGAAGGGGAGCACAGATTGTTAGTCTATGAGTACATGAGTAATGGCTCCTTGGCAAGCTTTCTCTtcgggatttctaggcctcaTTGGAATCAAAGGGTGCAGATTGCTTTGGGAATTGCAAAGGGTCTTACATACTTGCATGAAGAGTGTAGCACCCAAATTATTCATTGTGACATAAAGCCTCAAAACATACTCTTAGATGAGTTATTCACATCAAGAATTTCTGATTTTGGATTGGCAAAGCTCCTATTGACAGAGCAAACTCGCACAGCTCGGACCAACATAAGAGGGACAATTGGCTATTTTGCACCTGAATGGTTTAGGAAAAGTTCAATCACAACTAAAGTTGATGTTTACAGTTTTGGTGTGATGCTGTTAGAAATCATATGCTGCAAATCAAGTGCTGCATTTTCTACGGGAAATGAAGAAGGGGACCTCATAGAATGGGACCTCATAGATTGGGCCTATGATTGCTATAGCAAAAGGAAACTAGCTCAATTGGTAGATAATGATGAAGAGGCAAAGAATGACGAGAAGAGACTAGAAAAGTTTGTGATGGTGGCAATTTGGTGCATTCAAGAGGATCCATCACTGAGACCCTCCATGAAGAAGGTTACACAGATGCTTGAGGGTGTTACTGAAGTTTCTGTGCCACCTCGCCCTTCCTTGTTTAACTCGTCCTA	2405	0.3946	MASSTLHFNSLLLLLVLPHLPTVFTIKNSDTQIELNLSLPTGHSWNSLSNEFAFGLRNVQLGEQRKVSLLAIWFTKDVNQTIVWFSRDAAGSTVNLNNKGVAVYDQQGDQIWRRPNPESNETSYATMQDNGNFVLHDKDGNHLWESFQEPTDTILPGQKLNLTKVAELRARKSETDFSEGDFGFHCQDGGNLLLYYIPERVDYWDGRTLNSNADMQLFFNESGEISIRNQSYKMIITKGDPDSQEYRNYMARIDSDGGFRLYQRSRSCDTRFQWEEQETFPPGYDICFTFLTSVGGVFCGLNSYCEVMDKKPQCSCVDGYSFVDRKSCRPNFPLPSCQEDGWEKKKQHVQINEYINIDWPLSDYDYQMNNTTDKDYCRQQCLDDCFCAVAIYTDGRCWRKRFPLSNGRKGQSVNRIALVKVPTPEALANLKMKTTTKTETNKDQSTLVLVISILLGSSVFFNILLLAGSFVAFSILYHRKLVNLQQVSSLSAATVRRFTYKELEEATRGFQQTLGRGAFGTVYKGVLASDTTRYVAVKKLDKVVQEGEKEFKTEVSVIGQTHHRNLVRLLGYCDEGEHRLLVYEYMSNGSLASFLFGISRPHWNQRVQIALGIAKGLTYLHEECSTQIIHCDIKPQNILLDELFTSRISDFGLAKLLLTEQTRTARTNIRGTIGYFAPEWFRKSSITTKVDVYSFGVMLLEIICCKSSAAFSTGNEEGDLIEWDLIDWAYDCYSKRKLAQLVDNDEEAKNDEKRLEKFVMVAIWCIQEDPSLRPSMKKVTQMLEGVTEVSVPPRPSLFNSS	801

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva09g01240	801	ProSitePatterns	Protein kinases ATP-binding region signature.	514	539	IPR017441	GO:0005524
	Bva09g01240	801	Gene3D	Phosphorylase Kinase; domain 1	471	585	-	-
	Bva09g01240	801	ProSiteProfiles	Protein kinase domain profile.	508	797	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bva09g01240	801	Pfam	D-mannose binding lectin	92	169	IPR001480	-
	Bva09g01240	801	Gene3D	-	24	148	IPR036426	-
	Bva09g01240	801	SMART	blect_4	36	150	IPR001480	-
	Bva09g01240	801	CDD	PAN_AP_plant	358	422	-	-
	Bva09g01240	801	ProSiteProfiles	Bulb-type lectin domain profile.	30	148	IPR001480	-
	Bva09g01240	801	SUPERFAMILY	Protein kinase-like (PK-like)	490	784	IPR011009	-
	Bva09g01240	801	SMART	serkin_6	508	783	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bva09g01240	801	PANTHER	-	2	801	-	-
	Bva09g01240	801	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	2	801	-	-
	Bva09g01240	801	Gene3D	Transferase(Phosphotransferase) domain 1	586	791	-	-
	Bva09g01240	801	PIRSF	SRK	2	801	IPR024171	GO:0004674
	Bva09g01240	801	SUPERFAMILY	alpha-D-mannose-specific plant lectins	69	206	IPR036426	-
	Bva09g01240	801	Gene3D	-	150	271	IPR036426	-
	Bva09g01240	801	Pfam	Protein tyrosine and serine/threonine kinase	510	783	IPR001245	GO:0004672\|GO:0006468
	Bva09g01240	801	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	628	640	IPR008271	GO:0004672\|GO:0006468
	Bva09g01240	801	CDD	STKc_IRAK	514	785	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva09g01240	Bva-Chr9	6685513	6687918	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva09g01240	449	788	Receptor kinase-like Gene Family	AT5G45780	41.429	8.81e-76	255

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Bva09g01240		PK_Tyr_Ser-Thr	7.4e-52	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva09g01240	-		-	gmx:100796323	957.592