Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01232 ATGGAAAAGCAAGACCACACCCAGGAGAAGAAACAGACGTGGGGGACGTGGGAGGAGCTTCTACTCGCCTCCGCCGTGAAACGCCACGGATTCAAGGACTGGGACGCCGTGGCTATGGAGGTTCAGACTCGTACCACGCTACCCCATCTTCTCACCACCGCCCGTAGCTGTGAGTCGAAATTTTACGATCTGAAACGCCGATTTACCGCCCAATGCAACGAGGACGTGGCGAACGGGGCTGATAAAGTCGATCATGTTCCCTGGCTCGACGAATTACGGAAGCTACGCGTGGCTGAGCTCCGGCGAGAGGTTCAACGCTCTGACCTATCCATTCTGTCCTTGCAGCTGAAAGTGAAGAAGATGGAAGAGGAGAGAGAACGAAGCTTGaaggaaaatgatgaaaaagatGGTGACAAACCAGATCTGAGCGACACCGGCGAACAGAAACCggaaaatgacaagaaagCCGGGGAGGAAACAGAGCCTGAACCGGCGAGTTCTGAGCCGGTGCGGCTCGACGATAGTAATAAGCCACCTACTGGTGATGAATCCGACCGCGAAAATCAGTCTGTTAACGAGTCTAATTCGACCGGCTCGAGATCGCAGGGAGGAAAAACCGGAGAGGACAATGTAAagttgaaaatagaaaaagagccGTCTCCGGTTCATACCGGTTCGGAGGAACCGGATTCGGTTAGGCTAAAGAATAACCCGGTTGGGGAGGAATCTAATAACGGAAGCTACGATACCGCGGCTAAAATCCCAACGTGCGAGTCACTACCACCGAGTGTGGAACGAAAAGGGGAGGGCTCCTCCGAGTTACGCGATTCGGCGGCTCACTCGAGGGATGGTGAGGGAGGAACACGTGAGAGCAGTGAGGTGCAGAGCTCGGCGAGTTTGACGAGGAGGAGGAAGACAAGGCGGAGGAAGGAGGTTTCCGGTGGCGAGGAGCCGACTGAAAACGAGGAGGTGTCCGTCAAATCTCAACCGTTGGTTGGTGTATTAGAGTTGATCAAGGGACATGAACACAGCTCATTGTTCGAGCGCCGTCTCGAAAGCCAGGAATCGGATAAATACAGAAACATAGTGCGACAGCACGTGGATTTGGAAATAATTCAATCGCGTCTCCGAAAAGGGGACTATTCCTCCAGCATTCGCCTCTTCTTTCGCGaccttctccttctcttcaGCAACGCCGTCGTTTTCTTCCCCAGAGACTCCATCGAATCCCGCACAGCACACCAGCTTCGACACATTGTCACCAATGAAATGATGAACCACATTCAAACTCAGTCCGATGACCCGGTTACCCGAAATCCCAATCCACCCGTATCAAACCCGACATCAATACCCAAGCCCGATTCTCTTCTCTCCAAGCACAAAGCTTCTGCTCCCATACTGGTTTGCAGGAAACGCAGCTCAATGTCCAAACCTTCCTCTTCAAACTTTGCTCAAAAGAGTGACGCGCCCAGCAATGAGAACAAGAAGCCAGCTTTGGACACAAAGCAACCCGTTAAGCCATCTTCTTCTGATTCAGACGACGAGCCTCTTAAGGTGAAGGAAAAGCCTGTAACCGGAGCAAGAAGCTTAAGGAGATCGAGCAACAAGAATCTCACCAATAGCAACCCTACTAAGAAGCAGCTTCAATCAGGGTCAAACTCAAAATCCGGCTCGGCGGCGAGCAAGCCGGAGACCACACCCAAGAATGacaagaccaaaatggactctTCATCGGATAAGAAGAGGAGCGCAGCGGCGGATTTCTTGAAGAGAATAAAGCGAAATGCTCCGGCCGAGGCGGCATTAAAGAGTAGTGGCGGCGGCGGAAGTAGTGGGAAAGATCAGAAGAAAGTAGTAACAAGTGGAAAGGGTGataaagggaaagaaagaccTTCGAGGAATCAAGGTGGTGGCTCAGCTgagaagaagaatgagaatgagaatagCAGTCAATCGAAGAGAAGTGTTGGGAGGCCACCGAAGAAAGGAGCAGAAACTAGTGCCAAGCGTGGGAGGGAAACTAGTGCCGGGAAGGATAAAAGGGCCAAGAAACGCTCTAGGAGATG 2066 0.4913 MEKQDHTQEKKQTWGTWEELLLASAVKRHGFKDWDAVAMEVQTRTTLPHLLTTARSCESKFYDLKRRFTAQCNEDVANGADKVDHVPWLDELRKLRVAELRREVQRSDLSILSLQLKVKKMEEERERSLKENDEKDGDKPDLSDTGEQKPENDKKAGEETEPEPASSEPVRLDDSNKPPTGDESDRENQSVNESNSTGSRSQGGKTGEDNVKLKIEKEPSPVHTGSEEPDSVRLKNNPVGEESNNGSYDTAAKIPTCESLPPSVERKGEGSSELRDSAAHSRDGEGGTRESSEVQSSASLTRRRKTRRRKEVSGGEEPTENEEVSVKSQPLVGVLELIKGHEHSSLFERRLESQESDKYRNIVRQHVDLEIIQSRLRKGDYSSSIRLFFRDLLLLFSNAVVFFPRDSIESRTAHQLRHIVTNEMMNHIQTQSDDPVTRNPNPPVSNPTSIPKPDSLLSKHKASAPILVCRKRSSMSKPSSSNFAQKSDAPSNENKKPALDTKQPVKPSSSDSDDEPLKVKEKPVTGARSLRRSSNKNLTNSNPTKKQLQSGSNSKSGSAASKPETTPKNDKTKMDSSSDKKRSAAADFLKRIKRNAPAEAALKSSGGGGSSGKDQKKVVTSGKGDKGKERPSRNQGGGSAEKKNENENSSQSKRSVGRPPKKGAETSAKRGRETSAGKDKRAKKRSRR 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01232 688 MobiDBLite consensus disorder prediction 618 636 - -
Bva09g01232 688 MobiDBLite consensus disorder prediction 528 565 - -
Bva09g01232 688 Pfam Bromodomain 334 413 IPR001487 GO:0005515
Bva09g01232 688 SMART sant 10 67 IPR001005 -
Bva09g01232 688 MobiDBLite consensus disorder prediction 658 680 - -
Bva09g01232 688 PANTHER BNAC04G22430D PROTEIN 4 688 - -
Bva09g01232 688 MobiDBLite consensus disorder prediction 430 688 - -
Bva09g01232 688 MobiDBLite consensus disorder prediction 190 206 - -
Bva09g01232 688 Gene3D - 319 436 IPR036427 GO:0005515
Bva09g01232 688 CDD SANT 13 65 IPR001005 -
Bva09g01232 688 ProSiteProfiles SANT domain profile. 9 69 IPR017884 -
Bva09g01232 688 CDD Bromodomain 334 424 - -
Bva09g01232 688 MobiDBLite consensus disorder prediction 237 252 - -
Bva09g01232 688 SUPERFAMILY Homeodomain-like 7 46 IPR009057 -
Bva09g01232 688 Gene3D - 4 63 - -
Bva09g01232 688 MobiDBLite consensus disorder prediction 268 289 - -
Bva09g01232 688 ProSiteProfiles Myb-like domain profile. 6 65 IPR001005 -
Bva09g01232 688 SUPERFAMILY Bromodomain 325 430 IPR036427 GO:0005515
Bva09g01232 688 MobiDBLite consensus disorder prediction 473 506 - -
Bva09g01232 688 MobiDBLite consensus disorder prediction 637 656 - -
Bva09g01232 688 MobiDBLite consensus disorder prediction 507 527 - -
Bva09g01232 688 ProSiteProfiles Bromodomain profile. 339 410 IPR001487 GO:0005515
Bva09g01232 688 Coils Coil 111 138 - -
Bva09g01232 688 MobiDBLite consensus disorder prediction 120 327 - -
Bva09g01232 688 MobiDBLite consensus disorder prediction 120 189 - -
Bva09g01232 688 MobiDBLite consensus disorder prediction 566 597 - -
Bva09g01232 688 MobiDBLite consensus disorder prediction 207 230 - -
Bva09g01232 688 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 4 688 - -
Bva09g01232 688 SMART bromo_6 107 429 IPR001487 GO:0005515
Bva09g01232 688 Pfam Myb-like DNA-binding domain 11 64 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01232 Bva-Chr9 6650642 6655080 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva09g01232 Bromodomain 1.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01232 - - gmx:100811021 744.191