Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01204 ATGATGCCAACCAGTGGACAGTTAACAGTTCCTCCGGGCTTCCGATTTCACCCTACTGATGAGGAGCTTCTTTACTATTACCTCAGGAAGAAAGTCTCCTATGAAGCCATTGACCTTGATGTCATCAGAGAAGTAGATCTCAACAAACTTGAGCCATGGGACCTCAAAgATAAATGTAGAATTGGGTCAGGACCACAGAATGACTGGTATTTCTTTAGCCATAAAGATAAGAAGTACCCAACAGGAACCCGAACAAACAGGGCAACAACTGCTGGTTTCTGGAAAGCAACAGGAAGGGACAAAGCTATATACCTCAGTAATTCCAAGAGGATTGGCATGAGAAAAACCCTAGTCTTCTACACTGGCCGTGCTCCTCACGGCCAAAAGACAGATTGGATCATGCATGAATACCGCCTTGATGAAGATGATCACGAGGTTCAGcagGAAGATGGATGGGTGGTGTGCAGGGTTTTCAAGAAGAAGAACCTCAATAGAGGTTTCCAAGCTGAAATTGAAGAGGAAGAGCACTTAACCCACATGAGACCCAGTGGATCTTGCCAGGTGCTAGAACCAAAACAACATCATATGCAAGGACTATATGATTACAGCTTTGATGGATCAATGCACCTACCACAGTTGTTCAGTCCAGAACCAGCTGCTGTTGCTCCCTCATCCTTTCCCTCAACGATGAACGCCATGGACGTCCTCGAGTGCTCTCAAAACTTGTTGAGGCTCACTACAAATGGCTGTGGACTTAACCTCATGCAACCACCACAAGGGGAGAGGTTCCATGGTGACTGGACATTCTTGGACAAGCTCCTTGCATCACACCAAGGCTTGGATCATCAACACCCACAAAGCAAATGCAACCCTCCTACACATGCTGCTGCCGCTGTTGGTGCTTCGACTCAGAAATTCCCTTTTCATTGCCTAGGTTTTGACACTGATATCATGAAATTCTCCAAGTA 968 0.4587 MMPTSGQLTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNKLEPWDLKDKCRIGSGPQNDWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYLSNSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLDEDDHEVQQEDGWVVCRVFKKKNLNRGFQAEIEEEEHLTHMRPSGSCQVLEPKQHHMQGLYDYSFDGSMHLPQLFSPEPAAVAPSSFPSTMNAMDVLECSQNLLRLTTNGCGLNLMQPPQGERFHGDWTFLDKLLASHQGLDHQHPQSKCNPPTHAAAAVGASTQKFPFHCLGFDTDIMKFSK 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01204 322 SUPERFAMILY NAC domain 4 160 IPR036093 GO:0003677|GO:0006355
Bva09g01204 322 ProSiteProfiles NAC domain profile. 10 160 IPR003441 GO:0003677|GO:0006355
Bva09g01204 322 PANTHER NAC (NO APICAL MERISTEM) DOMAIN TRANSCRIPTIONAL REGULATOR SUPERFAMILY PROTEIN-RELATED 6 305 - -
Bva09g01204 322 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
Bva09g01204 322 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 305 - -
Bva09g01204 322 Gene3D NAC domain 19 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01204 Bva-Chr9 6496224 6497959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01204 6 322 NAC Transcription Factor Family AT1G79580 55.615 8.64e-118 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva09g01204 NAM 9.7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01204 - - gmx:100789606 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01204 09 6496224 6497959 Bva09g01204 09 6496224 6497959 ECH