Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01198 ATGGCGTCAAAGCCTGTCAAGAGGCATGGCTTACCTGACAGTTCATCAAGTGAAACTGGAGAAACGAAAACTGATGCAGCATCGGATTATAAGTTCGAGCCATCGGCCAAGCCTACTGATTTCGCTACTGCTCAACGCTCAAGTCCAGGTGCAAGAGTGCTTATGAGTCCTGATCACCCAACTACCTCACCAAGGGGTGCATGGGGGATATCTACACAAACAAGGACCACAAATCATGGCTATGGAAGTGGAAATAGCTCACGCAGTGATAGTTTAGAGAGCACCAGTAGCGCGCACATTAAGCCACATACTGGTGGAGATGTAAGGTGGGATGCTATTAACATGGTTTCCCGGGGCGGTGGCCCTCTTAATCTCAGCCATTTTCGGCTTCTCAAGCGGCTTGGATATGGAGATATTGGAAGTGTATATCTTGTGGACCTTAAAGGAACAAGGACTTACTTTGCCATGAAAGTGATGGACAAGGCATCACTTGCAAGCAGAAATAAGCTGCTGAGAGCCCAAACAGAAAGGGAGATTCTTGGACTTCTTGATCACCCCTTCTTACCCACTTTGTATTCTCACTTTGAAACTGATAAGTTCCACTGTTTGGTCATGGAGTTCTGCAGTGGAGGTAATCTTCATTCTCTTCGACAGAAGCAACCTAACAAGTATTTTACTGAAGAAGCCGCAAGGTTCTATGCTTCAGAGATTTTGTTAGCTCTTGAGTACCTGCACATGCTGGGAATTGTATACAGAGACTTGAAGCCAGAGAATGTATTGGTGAGAGATGAAGGGCATATCATGCTCTCGGATTTCGATTTATCTCTCCGCTGCTCGGTCAATCCCACACTTGTCAAGTCATCATCTGCTCATGCGAGCAATACCAGCAGCAATGGAGTCATTTTGGATGAAGAGAATGCAGTACAAAGTTGTATCCAGCCATCAACATTTTTCCCTCGCATTTTACCTTCAAAAAAGAACCGTAAATCAAAATCAGATTTTGGCCTTTTGGTTGGAGGAGATCCCCTACCTGAACTAATGGCAGAGCCTACCAATGTGCGCTCAATGTCTTTTGTGGGCACGCATGAATATCTTGCTCCAGAGATTATCCGCGGAGAGGGCCATGGCAGTGCTGTAGATTGGTGGACATTCGGCATCTTCTTGTACGAGCTGTTGCACGGCACAACTCCGTTCAAGGGTGCCGGAAACCGGGCCACGCTTTTCAATGTCGTCGGTCAGCCATTGAGGTTTCCAGATGCTCCCCATGTCAGCAATGCATCCCGGGATCTCATAAAAGGATTGTTAGTGAAGGAACCACACAAGAGAATTGCTTATACAAGAGGTGCAACAGAGATAAAAAGACACCCTTTTTTTGAAGGAGTGAACTGGGCTCTTGTAAGAAGTGCTACACCTCCCATCATACCAGATCCTGTAGATTTTTCACAGTATGCCAGCAAAGATACAACACCCCCTGCAGCAGAGAAGAAGATGGCAGATATTGCAAATGATAAAAACAGTAGACACACTGATTCTTCTTACGtagattttgagtattttta 1559 0.4535 MASKPVKRHGLPDSSSSETGETKTDAASDYKFEPSAKPTDFATAQRSSPGARVLMSPDHPTTSPRGAWGISTQTRTTNHGYGSGNSSRSDSLESTSSAHIKPHTGGDVRWDAINMVSRGGGPLNLSHFRLLKRLGYGDIGSVYLVDLKGTRTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSHFETDKFHCLVMEFCSGGNLHSLRQKQPNKYFTEEAARFYASEILLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVNPTLVKSSSAHASNTSSNGVILDEENAVQSCIQPSTFFPRILPSKKNRKSKSDFGLLVGGDPLPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGAGNRATLFNVVGQPLRFPDAPHVSNASRDLIKGLLVKEPHKRIAYTRGATEIKRHPFFEGVNWALVRSATPPIIPDPVDFSQYASKDTTPPAAEKKMADIANDKNSRHTDSSYVDFEYF 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01198 519 ProSiteProfiles Protein kinase domain profile. 128 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01198 519 MobiDBLite consensus disorder prediction 65 101 - -
Bva09g01198 519 SMART serkin_6 128 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01198 519 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 47 519 - -
Bva09g01198 519 SUPERFAMILY Protein kinase-like (PK-like) 125 488 IPR011009 -
Bva09g01198 519 Gene3D Transferase(Phosphotransferase) domain 1 212 283 - -
Bva09g01198 519 PANTHER FLIPPASE KINASE 1-RELATED 47 519 - -
Bva09g01198 519 Pfam Protein kinase domain 129 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01198 519 Pfam Protein kinase domain 352 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01198 519 Gene3D Phosphorylase Kinase; domain 1 126 211 - -
Bva09g01198 519 MobiDBLite consensus disorder prediction 486 509 - -
Bva09g01198 519 CDD STKc_phototropin_like 126 479 - -
Bva09g01198 519 MobiDBLite consensus disorder prediction 1 104 - -
Bva09g01198 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Bva09g01198 519 Gene3D Transferase(Phosphotransferase) domain 1 353 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01198 Bva-Chr9 6452439 6455002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01198 92 519 AGC Kinase Gene Family AT1G79250 75.391 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bva09g01198 Pkinase 2.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01198 - - gmx:100802478 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01198 09 6452439 6455002 Bva09g01198 09 6452439 6455002 ECH