Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01182 ATGGAGGTTCCTCCCTCCACCACCCAGTCACCGACACCAAAAGTGACCAGTCGCAAGCGCAAAACTGAGATCAAGAAGATTGAAAACAAGCAAGCAAGGAATGTCTGCTTTTCTAAGCGCCGTCAGGGACTGTTCAAGATTGCCCACAAGTACCACCGTATCTCCAAGTCCGACGTTGCCGTCCTCGTCGTCTCCTCTTCCGGCAAATCCTACGTCGACGGTTCTCCCTCTTTCGACCCCATTGTTCAAAAATTCCTTCATACCCAGTCCAATTTTCCTGATTCTGAGTCTACAACTACCATCACCGGTTCCTCTGTTTCTGATTGTGCCTCTGCTTCTAATGCTGTTATCGGTGAAGGATTTGCAGATTCCTTGAGGGAATGGGTGGAGTTCATGAAAGTGGAAGAATGTGGGAGCTTGGAAGAATTGAAGGTGATGAAGAAAACTCTtgaagaaatcaaagagaaattgGTCCAGGGTTTTGTGGACTCTCTCGTCATGGGAGGAGTCTA 512 0.4648 MEVPPSTTQSPTPKVTSRKRKTEIKKIENKQARNVCFSKRRQGLFKIAHKYHRISKSDVAVLVVSSSGKSYVDGSPSFDPIVQKFLHTQSNFPDSESTTTITGSSVSDCASASNAVIGEGFADSLREWVEFMKVEECGSLEELKVMKKTLEEIKEKLVQGFVDSLVMGGV 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01182 170 MobiDBLite consensus disorder prediction 1 25 - -
Bva09g01182 170 PANTHER SERUM RESPONSE FACTOR HOMOLOG 19 151 - -
Bva09g01182 170 PRINTS MADS domain signature 39 54 IPR002100 GO:0003677|GO:0046983
Bva09g01182 170 PRINTS MADS domain signature 54 75 IPR002100 GO:0003677|GO:0046983
Bva09g01182 170 PRINTS MADS domain signature 19 39 IPR002100 GO:0003677|GO:0046983
Bva09g01182 170 ProSiteProfiles MADS-box domain profile. 17 77 IPR002100 GO:0003677|GO:0046983
Bva09g01182 170 MobiDBLite consensus disorder prediction 1 15 - -
Bva09g01182 170 SMART madsneu2 17 76 IPR002100 GO:0003677|GO:0046983
Bva09g01182 170 SUPERFAMILY SRF-like 18 88 IPR036879 GO:0003677|GO:0046983
Bva09g01182 170 Coils Coil 140 160 - -
Bva09g01182 170 Gene3D - 29 97 IPR036879 GO:0003677|GO:0046983
Bva09g01182 170 PANTHER - 19 151 - -
Bva09g01182 170 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 26 71 IPR002100 GO:0003677|GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01182 19 85 MADS-box Gene Family AT5G65050 45.588 3.37e-12 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Bva09g01182 SRF-TF 2.6e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01182 - K12412 cit:107177971 97.4413