Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01175 ATGGCTCCAATGAGTCTCCCACCTGGGTTTAGGTTCCATCCAACAGATGAAGAGCTTGTAGCATACtacttggaaagaaaattaacaggACAAACAATAGAGCTTGAAATCATCCCAGAAGTTGATCTGTACAAATGTGAACCTTGGGATTTGCCTGACAAGTCATTTTTGCCAAGCAAAGATATGGAATGGTACTTCTACAGTCCAAGAGATAGAAAGTATCCAAATGGGTCAAGAACTAACAGGGCAACAAGAGCTGGTTATTGGAAAGCAACTGGGAAAGATAGAGCAGTGCATTCTCAAAAGCGACAGGTTGGCATGAAGAAGACATTGGTTTATTACAGGGGAAGAGCCCCTCATGGGATTAGAACCAACTGGGTCATGCATGAGTATCGTCTAATCGAATCGGTGCCTGCTACATCTTCCTCATCTTTGAAGGATTCCTATTCCTTGTGTCGCGTTTTCAAGAAGACAATACAAACAATCCCCAAAcctaaacaagaagaaaaaacagagaatGCCAAGAAGGAATCTATGTGGGTCTCAGAAGAACAAACACAAGGAGAAGACTCAAGTGGCATTGAGAATATTTCTAGAGAAACAGAAATGCCAGATGATGAGAAGAAAGGAATAAATCATAAGATTGATCCTCTTAAATTTCCATGTGATGCTTCTTCTTCAGATGTCACTCAAGGAACAACCCCAGAATATGGTGTAGCAGATGATTGCCAAATGCAATTTGCTTCAGATGAAGCTAATAGTGCATCAGATTCATATTCTCTTGGTGTGGATTACTACCCATCAAATCTATTTCAGGATATGGAGCTGCCTATCTATGCAGCAGGCTTACATTATCAACTTTCATACCCTCCTTTGGATCTGGAAGATTTCCCTCAAATAAACTTATCGGAGACAAAATTGATGAAGACTGAAGTGACTGAGGAATGCATGTTATACGACAAATACAGGGACTGCATGAATGGAACACTAGAAGAGATCTTCTCTTTGTGTTCCTCTCAGGATAATTCTGTGGCATTGTCTGTGATAGATTCATG 1055 0.3896 MAPMSLPPGFRFHPTDEELVAYYLERKLTGQTIELEIIPEVDLYKCEPWDLPDKSFLPSKDMEWYFYSPRDRKYPNGSRTNRATRAGYWKATGKDRAVHSQKRQVGMKKTLVYYRGRAPHGIRTNWVMHEYRLIESVPATSSSSLKDSYSLCRVFKKTIQTIPKPKQEEKTENAKKESMWVSEEQTQGEDSSGIENISRETEMPDDEKKGINHKIDPLKFPCDASSSDVTQGTTPEYGVADDCQMQFASDEANSASDSYSLGVDYYPSNLFQDMELPIYAAGLHYQLSYPPLDLEDFPQINLSETKLMKTEVTEECMLYDKYRDCMNGTLEEIFSLCSSQDNSVALSVIDS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01175 351 MobiDBLite consensus disorder prediction 163 183 - -
Bva09g01175 351 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Bva09g01175 351 MobiDBLite consensus disorder prediction 163 208 - -
Bva09g01175 351 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Bva09g01175 351 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Bva09g01175 351 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 312 - -
Bva09g01175 351 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 312 - -
Bva09g01175 351 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01175 Bva-Chr9 6279977 6284123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01175 1 335 NAC Transcription Factor Family AT1G54330 54.118 2.47e-106 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva09g01175 NAM 9.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01175 - - gmx:100808325 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01175 09 6279977 6284123 Bva09g01175 09 6279977 6284123 ECH