Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01164 aTGGAAAGAATGTTCCCTCCAAAGAAGCCCTCAACTATGAATTCCCATGACAGACCCATGTGTGTTCAAGGTGACTCTGGTCTTGTTCTCACCACAGACCCGAAGCCTCGCCTCCGCTGGACTGTTGAGCTCCATGAACGCTTCGTCGACGCCGTTACACAGCTTGGAGGGCCTGATAAGGCCACTCCTAAGACCATCATGAGGGTTATGGGTGTGAAGGGTCTTACCCTTTACCACCTCAAGAGCCATCTTCAGAAATTCAGGCTTGGAAAGCAACCCCACAAGGAATTCAATGATCACTCGATCAAGGATGGTATGCGAGCTTCGGCTTTGGAACTGCAAAGAAGCACTGCTTCATCATCCGGGATGATTGGCCGCAACATGAATGAGATGCAAATGGAGGTGCAGAGAAGAATCCATGAACAACTTgagGTTCAGAAACACCTTCAGCTGAGGATCGAGGCTCAAGGGAAATACATGCAGAGTATATTGGAGAAGGCTTATCAAACACTAGCAGGTGAAAACATGACAGCTGCAGCCACTAATTTAGAGGGCATTGGACCCCAAGGCATTCTTGACATGGGAATCCTCAAAGATTTTGGTTCccctcttaatttttcttcttttcaagaCCTTAACATCTATGGCGGTGACCAACTTGATCTTCAGCATAGCTTGGACAGGCCACCCCTTGAAGGGTTTATCCCAAATAGTGAGAATTTGTGCTTGGGGAAGAAGAGGCCTAGCCCCTATAGTGGAAGTGGAAAGAGCCCTTTAATTTGGAATGACGATCTCCGGCTTCAAGATTTCGGAACAGCCTCATCATGTCTTGGGACTCAAGATGATCCTTTCAAAGGTGACCAAATTCAGATTGCACCACCTTCTTTGGATAGAGGCCCTGACATTGAATCCATCCCGGAGATCTACGACACGAAGCCGGTACTCCAAAGAGAAGCCGTGGGTGACAAGAAATTTGATGCATCAGTGAAGCTTGAAAGGCCATCACCAAGAAGAGCACCACTTCAAGCAGAAAGGATGAACCCTATGATTAGTACTGGCACAGTAGCACAAGGTAGAGGTTCACCATTTGGGtg 1094 0.4653 MERMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDGMRASALELQRSTASSSGMIGRNMNEMQMEVQRRIHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMTAAATNLEGIGPQGILDMGILKDFGSPLNFSSFQDLNIYGGDQLDLQHSLDRPPLEGFIPNSENLCLGKKRPSPYSGSGKSPLIWNDDLRLQDFGTASSCLGTQDDPFKGDQIQIAPPSLDRGPDIESIPEIYDTKPVLQREAVGDKKFDASVKLERPSPRRAPLQAERMNPMISTGTVAQGRGSPFG 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01164 364 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 4 314 - -
Bva09g01164 364 MobiDBLite consensus disorder prediction 1 20 - -
Bva09g01164 364 MobiDBLite consensus disorder prediction 333 364 - -
Bva09g01164 364 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Bva09g01164 364 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Bva09g01164 364 Pfam MYB-CC type transfactor, LHEQLE motif 131 170 IPR025756 -
Bva09g01164 364 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 314 IPR044848 GO:0003700
Bva09g01164 364 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Bva09g01164 364 Gene3D - 34 92 - -
Bva09g01164 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01164 Bva-Chr9 6210898 6212952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01164 4 364 G2-like Transcription Factor Family AT1G79430 59.574 1.07e-128 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva09g01164 Myb_DNA-binding 2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01164 - - ccaj:109805894 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01164 09 6210898 6212952 Bva07g01399 07 14327864 14329953 BWGD
Bva09g01164 09 6210898 6212952 Bva09g01164 09 6210898 6212952 ECH