Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01161 ATGGCAACATCGAACTCTGATGGGTCTGGATCCACTGAATCAACAGCAACGAGAAGAAATACCAAGCGACCTAAGTATTCAAAGTTTACACAACAAGAACTTCCAGCATGCAAGCCGATTCTTACTCCACGAGCGGTTATTTCAGCATTCTTGCTTGTCAGTGTTGTCTTCATTCCTATTGGAGTTGCTTCCCTATTTGCTTCAAACGATGTGGTTGAAATTGTTGATAGATATGATTTTGAATGCATACCACAAAACTTTAGAAACGACAAAGTTGCATTCATTCAGAACGACACACATAATAAAACATGCACGAGGCAGCTCAATGTGACAAAACGTATGAAACAGCctgtttatgtttattatcAACTTGACAACTTCTACCAGAATCATCGACGATATGTCAAAAGTCGAAATGATGAGCAGTTACGGGATCGTAAAAATGAGAATTCAACAAGCGGTTGCAAGCCTGAAGATGTTGCAAATGGAAACACTATTGTACCTTGTGGTCTTATAGCTTGGAGCTTGTTCAATGATACTTACAGCTTCTCCCGTGGGAATACAAATCTGACAGTTAATAAGAAAGGCATATCTTGGAAGAGTGACAGGGAGCACAAATTTGGAAACGATGTTTTCCCTAAGAACTTCCAGAATAGTTCTCTTAAAGGTGGTGCTAGTCTCGATCCAAACATATCATTGAGTGAACACGAAGATCTCATCGTGTGGATGCGAACTGCAGCCTTGCCAACCTTTAGGAAGTTGTATGGAAAGATAGAGGTAGATCTGCAACCAGGTGATACCATAAATGTGGAAGTGTTGAACAGATACAACACTTACAGTTTTAGTGGCAAGAAGAAGCTTGTACTTTCAACTACTAGCTGGCTTGGTGGAAAGAATAACTTCCTTGGCATTGCTTATCTCACTGTTGGGGGACTATGCTTCTTTTTGGCTATGGCTTTCACcattatatactttttcaaGCCAAGGCAACTGGGAGACCCCTCATACTTGTCATGGAATAGGAATGCTGGAAGGCACTA 1040 0.4 MATSNSDGSGSTESTATRRNTKRPKYSKFTQQELPACKPILTPRAVISAFLLVSVVFIPIGVASLFASNDVVEIVDRYDFECIPQNFRNDKVAFIQNDTHNKTCTRQLNVTKRMKQPVYVYYQLDNFYQNHRRYVKSRNDEQLRDRKNENSTSGCKPEDVANGNTIVPCGLIAWSLFNDTYSFSRGNTNLTVNKKGISWKSDREHKFGNDVFPKNFQNSSLKGGASLDPNISLSEHEDLIVWMRTAALPTFRKLYGKIEVDLQPGDTINVEVLNRYNTYSFSGKKKLVLSTTSWLGGKNNFLGIAYLTVGGLCFFLAMAFTIIYFFKPRQLGDPSYLSWNRNAGRH 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01161 346 MobiDBLite consensus disorder prediction 138 159 - -
Bva09g01161 346 MobiDBLite consensus disorder prediction 138 153 - -
Bva09g01161 346 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 65 330 IPR005045 GO:0016020
Bva09g01161 346 PIRSF Lem3/Cdc50 1 342 IPR005045 GO:0016020
Bva09g01161 346 MobiDBLite consensus disorder prediction 1 17 - -
Bva09g01161 346 MobiDBLite consensus disorder prediction 1 28 - -
Bva09g01161 346 PANTHER CELL CYCLE CONTROL PROTEIN 50 3 344 IPR005045 GO:0016020
Bva09g01161 346 PANTHER ALA-INTERACTING SUBUNIT 3 3 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01161 Bva-Chr9 6187168 6190673 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01161 - - gmx:100806200 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01161 09 6187168 6190673 Bva07g01401 07 14345638 14349507 BWGD
Bva09g01161 09 6187168 6190673 Bva09g01161 09 6187168 6190673 ECH