Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01152 ATGGAAACAAGAGGAGGTTACTTTAGATTGAGAATGGGAACCAGCATTGTTTTCCTCTATCTTACTCTATCTACTTCTCTCATCCATTGTGATGCAGAAAGAACAACGAGGCCATTCAAAGGCCCTAGACATAAGAGAAGCTTGATCGACAAGCAACCTAAGAAGTTGAAAACGACTAAACATTTTCATGTTAATCCTACTCTTTTTTTGGCCAATGTTGTTAATCCAACCTTGGACTCTTCGAATGCACAACCTTATAGTGTTAGCTCACCAAACTCTCTGCCTCCATACGAATCACTAGCCCCAATTCCATTGTCCGAAAATAGCCCTCCATTTTGTGTAAGTCCACCAAATACCCCTTCTACAACTATTCCAACCCCCATCGGATTTACACCATTATCCCCACCTTACAATTACCCTTCACCACTTCTGCCACCTCCAACTCCAACCAGCACTGTTCCAGGCCCACCTGGGTCCACCATGAGCCCACCTTATTTTGAGCCCAGCCCACCATATTACATCCCATCCCCCTCCGGCGGCATTGTCCCTGGCCCACCAACAACTGTTCCATCACCTTCCGCCGGCGGTGGCATTTTCCCGGGCCCACCAACCACCTTTCCATCACCCTCCGGTGGTGGTGTTCCCAGCCCAACAGTGTTTCAACCACCGGTTGTCTTTCCACCACCAAGTGTGCCGCCACCACCCAACACTGGCCCAAGCATTACCCTGTGGTGTGTAGCTAAGCCTTCAGTACCCGACCCGATTATGCAAGAGGCTATGAATTATGCTTGCGGGTCAGGAGCAGACTGTGATTCGATTCAGCCCAATGGACCTTGCTTTGAACCCGATACTGTATATGCACACGCCTCGTACGCTTTCAATAGTTATTGGCAAAAAACCAGGGTTGCCGGTGGCTCCTGTGACTTTGGAGGGACAGCAATACTAGTTAGCGTTGATCCTAgtTATGATGGATGCCACTTCGTCTACTTTTG 992 0.4869 METRGGYFRLRMGTSIVFLYLTLSTSLIHCDAERTTRPFKGPRHKRSLIDKQPKKLKTTKHFHVNPTLFLANVVNPTLDSSNAQPYSVSSPNSLPPYESLAPIPLSENSPPFCVSPPNTPSTTIPTPIGFTPLSPPYNYPSPLLPPPTPTSTVPGPPGSTMSPPYFEPSPPYYIPSPSGGIVPGPPTTVPSPSAGGGIFPGPPTTFPSPSGGGVPSPTVFQPPVVFPPPSVPPPPNTGPSITLWCVAKPSVPDPIMQEAMNYACGSGADCDSIQPNGPCFEPDTVYAHASYAFNSYWQKTRVAGGSCDFGGTAILVSVDPSYDGCHFVYF 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01152 330 MobiDBLite consensus disorder prediction 139 164 - -
Bva09g01152 330 Gene3D - 240 327 - -
Bva09g01152 330 PRINTS Proline rich extensin signature 182 199 - -
Bva09g01152 330 PRINTS Proline rich extensin signature 125 137 - -
Bva09g01152 330 PRINTS Proline rich extensin signature 142 163 - -
Bva09g01152 330 PRINTS Proline rich extensin signature 202 227 - -
Bva09g01152 330 PRINTS Proline rich extensin signature 88 104 - -
Bva09g01152 330 PRINTS Proline rich extensin signature 164 180 - -
Bva09g01152 330 PANTHER BETA-1,3 GLUCANASE 136 330 IPR044788 -
Bva09g01152 330 Pfam X8 domain 243 313 IPR012946 -
Bva09g01152 330 PANTHER EXTENSIN-LIKE 136 330 - -
Bva09g01152 330 SMART X8_cls 243 327 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01152 Bva-Chr9 6076566 6078644 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01152 242 327 Glycoside Hydrolase AT3G13560 49.425 2.86e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01152 - - lang:109347988 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01152 09 6076566 6078644 Bva09g01152 09 6076566 6078644 ECH