Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01142 ATGGAATGGTGTGAAGGAGATGATCGTGTTCCTCCAGGTTACAAATTTTATCCTACCGAACAGGAGTTGGTGAGTTATTATTTGCTTAGGAAGGTCCTAGGTTTTATTGACGACACTGTTCTTATACCTGTTTGTGACCTGTACGGCGACACGAACCCGTGGGATTTATGGGAGATTCTGAAAGAGAGCCAGACCTTTAATGGCAGTGAAGTTTACGTGTTTACCACGCTAAAGAGGAAGTCCGTCAAAGATGCTCGGGTAACTCGCAGTGTAGGGTTGGGGTGTTGGTCGGGCGAGGATGCTGCGAAAGCTGTTTACGACGGCCAGAATCGAGGGTTGAAGATTGGATCAAGGAAAAGATTCCGTTTCGAGAAGAGTGGAACCGATCATGATGGTGGATGGATCATGATGGAGTATAGGCTTGAAAACTCTTGGCTTGAAAAAATAGGCGTTGACGTTAAAGATCACAATATTGTTTCAGATTTGGTGATAtgcaaattgaaaaagaacaCTAGACGACAACCAAAATCAGTGTCGGTTGTGGTTGCATCGTCTTCTTCAGTTACTGATGAAGAGAATGACAACAAtggaaggaagagaaagcGAGGCGGGCTTCAGGCTGATGAGGTGGTGTCAGAGAATAACAAAAGGCTAAAGGAGGCATCTCATCATGATGAGTTGAAAGAACTAACAGAAAGCCTTGAAAGAGATTTGCTTGCTGTGGAATATGATCATTATGATGAGAGCAATGATGagttgaaaaaatttacaGAAAGCCTTGGAAGAGAGTTGCTTGCGGTGGAATACGATCATCATGATGAGAGCAATgatgagttaaaaaaatttacagaaaGCATTGAAAGAGATTTGCTTGCTGTGGAATATGATCATAATGATGAGAGCAATGAtgagttgaaaaaaattacagaaagcCTTGAAAAAGAGTTGCTCGCGATGGAATATGATCGACATGATGAGAGCAAAGGGAGGGAGTACAAGGTTAACAGTGAAGTCATAGTTGAGGAgccctttttcaattttggtgattttggttttgaagGATTCGACAGCAACGGGATTCAATGGGATGACAGTAGCAGCAACATGTTCTTTGACATGGACTGGATTCACAATAAATATCCAGAATTGGCAGCCCCGTCCACGGACAACTTCTGCAATCTGAATCCTCAAACTTCTACCTCAACTACTGACGAGGTTGTTGTTATCCGGTg 1232 0.3904 MEWCEGDDRVPPGYKFYPTEQELVSYYLLRKVLGFIDDTVLIPVCDLYGDTNPWDLWEILKESQTFNGSEVYVFTTLKRKSVKDARVTRSVGLGCWSGEDAAKAVYDGQNRGLKIGSRKRFRFEKSGTDHDGGWIMMEYRLENSWLEKIGVDVKDHNIVSDLVICKLKKNTRRQPKSVSVVVASSSSVTDEENDNNGRKRKRGGLQADEVVSENNKRLKEASHHDELKELTESLERDLLAVEYDHYDESNDELKKFTESLGRELLAVEYDHHDESNDELKKFTESIERDLLAVEYDHNDESNDELKKITESLEKELLAMEYDRHDESKGREYKVNSEVIVEEPFFNFGDFGFEGFDSNGIQWDDSSSNMFFDMDWIHNKYPELAAPSTDNFCNLNPQTSTSTTDEVVVIR 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01142 410 MobiDBLite consensus disorder prediction 176 204 - -
Bva09g01142 410 Gene3D NAC domain 19 174 IPR036093 GO:0003677|GO:0006355
Bva09g01142 410 ProSiteProfiles NAC domain profile. 10 170 IPR003441 GO:0003677|GO:0006355
Bva09g01142 410 MobiDBLite consensus disorder prediction 176 191 - -
Bva09g01142 410 SUPERFAMILY NAC domain 8 169 IPR036093 GO:0003677|GO:0006355
Bva09g01142 410 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 290 - -
Bva09g01142 410 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 11 290 - -
Bva09g01142 410 Pfam No apical meristem (NAM) protein 11 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01142 Bva-Chr9 6007307 6008539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01142 10 195 NAC Transcription Factor Family AT3G04070 32.812 1.14e-18 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva09g01142 NAM 1.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01142 - - pvy:116124271 132.88