Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01128 ATGGATCAGTCTGAGCAGAcacaacagcagcagcaacatgTGGTTGGAGTTGCAACAGGCTCTAACCAAATGGCCTATTCTACTCACTACCAAACTGCTCCCATGGTGGCTTCTGGCGCACCTGCTATAGCTGTACCTTCACCAACGCAGCCTACAGCTCCCTTCTCTAATTCCCCTCGCCAACTCGCATATCAACAAGCGCAGCATTTCCACCATCAACAGCAGCAtcaacaacagcagcagctTCAGATGTTCTGGGCCAACCAAATGCAAGAAATTGAGCAAACTACTGACTTCAGGAACCATAGTCTTCCCCTTGCTcgtatcaaaaaaataatgaaagctGACGAGGATGTCCGGATGATCTCCGCAGAAGCTCCAGTCATATTTGCAAAAGCATGTGAAATGTTCATCTTGGAGCTGACTTTGCGGTCTTGGATCCACACGGAAGAGAACAAGAGGAGAACGCTGCAAAAGAATGACATAGCAGCTGCAATTTCAAGAACTGATGTTTTTGATTTCTTGGTTGATATTATTCCAAGAGATGAGTTGAAAGAAGAGGGACTTGGAGTAACAAAGGCTTCCATTCCTGTAATGGGTTCTCCAGCTGATATTCCATATTATTATGTCCAGCCGCAGCATCCCGTAGGACCTACAGGGATGATCATGGGAAAGCCAGTTGACCAAGCTGCACTTTACGCGACGCAGCAGCCTCGGCCTCCAATGGCTTTCATGCCATGGCCACAGGGACAACATGAGCAACAGCATCAAACAGACACTTG 782 0.4412 MDQSEQTQQQQQHVVGVATGSNQMAYSTHYQTAPMVASGAPAIAVPSPTQPTAPFSNSPRQLAYQQAQHFHHQQQHQQQQQLQMFWANQMQEIEQTTDFRNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKASIPVMGSPADIPYYYVQPQHPVGPTGMIMGKPVDQAALYATQQPRPPMAFMPWPQGQHEQQHQTDT 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01128 260 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 259 - -
Bva09g01128 260 SUPERFAMILY Histone-fold 63 175 IPR009072 GO:0046982
Bva09g01128 260 Pfam Core histone H2A/H2B/H3/H4 57 166 IPR007125 GO:0003677
Bva09g01128 260 Gene3D Histone, subunit A 64 181 IPR009072 GO:0046982
Bva09g01128 260 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 7 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01128 Bva-Chr9 5931029 5934016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01128 82 213 CCAAT-HAP5 Transcription Factor Family AT1G56170 90.226 1.07e-83 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bva09g01128 Histone 1.7e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01128 K08066 - zju:107417913 404.445