Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01123 ATGGCACTTAGCTCGTACCTGAACTGTGATGTCCTTCAAGCTCTGAACCAAGAAATGGGAATTTTCCATCACCCACCACATGATAAAAGTTTCTCGCAGCTTGCACCAACAAATCTACTTCTTCCTCATTATTCTTCAGGTGAAAGCTTCTCGCTTGCAAACACGTTCTTTGATAATTCCTATATTGACCCATTTCTCAACCCAGAGCTCTACCTTCCATGCCCACCACAATCATATGAATGTGAATTGCCTTCCATTGAGGATTGTAATTGTAATGCAGTCAATTACAAGCAATCTAGATTCCTTCGTTGCCCTAAACGCCAAAGGAGCTGCTATGACAATCAATATCATCCTCAAGAGCAGTACTCTTCTTTGGATGTTGCTCCGgccaattttttctttgatgggTTTTCTCCGAACCCTCATTgttccttctcttcttctgaGGAACTGCTACCTGAACTCTTGTTCCCGGCAGTGCCGGAGTTCAAAGCTCCGGCACTTCCTCCGGCAGGGAATTGCGTGGGGAATATCATCAATGATTTTGAGAAGACGGTGTCCCCGCAGAGCATAGCGGCGCGtgagaggaggaggaagatCACTGAGAAGACACAGGAGTTAGGGAAGCTGGTCCCTAATGGGAATAACATGAACACAGCTGAGATGTTCAGTGCAGCTGCCAAGTATGTCAAGTTCTTGCAAGCACAGGTTGTTGTGCTTCAACTCATCAACACTCTTGagGAAGAAGATAAGGAAGCAACTACTCCAATTCCAAGTGAAGATCTCAAGGCTCTGCTTGGCTCTACCTCAGTTCAAGAGAAGCTGTACTTGGAAGAGAAGTGCTTTTTTCCGAAACAGCTTGTCAGCAGTTTGACAAAAGATCCTCAGCTCCAATCAAAACCTTCCATCCTCAAAGATCTCAACCAGTTGATTGCCAACAACATTTG 947 0.4234 MALSSYLNCDVLQALNQEMGIFHHPPHDKSFSQLAPTNLLLPHYSSGESFSLANTFFDNSYIDPFLNPELYLPCPPQSYECELPSIEDCNCNAVNYKQSRFLRCPKRQRSCYDNQYHPQEQYSSLDVAPANFFFDGFSPNPHCSFSSSEELLPELLFPAVPEFKAPALPPAGNCVGNIINDFEKTVSPQSIAARERRRKITEKTQELGKLVPNGNNMNTAEMFSAAAKYVKFLQAQVVVLQLINTLEEEDKEATTPIPSEDLKALLGSTSVQEKLYLEEKCFFPKQLVSSLTKDPQLQSKPSILKDLNQLIANNI 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01123 315 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 1 307 - -
Bva09g01123 315 PANTHER TRANSCRIPTION FACTOR BHLH52-RELATED 1 307 - -
Bva09g01123 315 SMART finulus 190 239 IPR011598 GO:0046983
Bva09g01123 315 Gene3D - 187 252 IPR036638 GO:0046983
Bva09g01123 315 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 184 233 IPR011598 GO:0046983
Bva09g01123 315 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 243 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01123 Bva-Chr9 5886702 5888338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01123 135 315 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 42.162 2.78e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01123 - - lang:109363529 209.92