Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01119 ATGAATAAGTTTACATCTGGAGAATGCAATATTCTTCTCTGTACTGATGTGGCAAGTAGAGGACTGGATATTCCCACTGTGGATGTGGtcataaattatgatattccCACAAACTCTTGGGATTACATACATCATGTGGGAAGGACAGCACGTGCGGGGCGATCCGGGGTCGCTGTTTCCCTTGTGAATCAATATGAATTGGAATGGTACATTCAAATGGAGAAACTTGTAGGCAAGAAACTACCAGAGTATCCTACTGAGCATGAAGAGGTTTTGCAACTAGAGAAGCGCGTTAGTGAAGCCAGAAGACTAGCAGTACTGATAATCGagctgaggaagaagaaggagatgcAGAAGACTGGTTTTCTATG 371 0.3881 MNKFTSGECNILLCTDVASRGLDIPTVDVVINYDIPTNSWDYIHHVGRTARAGRSGVAVSLVNQYELEWYIQMEKLVGKKLPEYPTEHEEVLQLEKRVSEARRLAVLIIELRKKKEMQKTGFL 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01119 123 Gene3D - 1 121 IPR027417 -
Bva09g01119 123 PANTHER BNAC02G41920D PROTEIN 1 107 - -
Bva09g01119 123 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 92 IPR001650 -
Bva09g01119 123 CDD SF2_C_DEAD 1 62 - -
Bva09g01119 123 Pfam Helicase conserved C-terminal domain 1 53 IPR001650 -
Bva09g01119 123 PANTHER RNA HELICASE 1 107 - -
Bva09g01119 123 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 91 IPR027417 -
Bva09g01119 123 SMART helicmild6 1 53 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01119 Bva-Chr9 5844705 5846014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01119 1 85 Eukaryotic Initiation Factors Gene Family AT3G19760 41.176 2.27e-19 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01119 K14777 - gmx:100775796 190.274