Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01116 ATGTTTGCTTTATCTTCTCGTCCACCATTTCTACGTCCACTTGGACATTCCTTCGAACATGTTCTGAGCAAAGCCACCCAGCTCTCTCCTCCTTCTAGTTGTATCCCAATGGCTTCAGCTTCGGGGACTCTCTTCTCCTCAAACACTAGGGTTTTCTCTCCCAATTCATCCTCTTTTGCTTCCTCCATCTCTGATCACCCTCTTTCTCAAACTCCAACCATTCCCGAGGGCCTCTGCAAACCCTTTCATTCTTGGGTTCCCAAATCAGTTTCCTCCTCTCGTGACTCCCATTGTAAACGAGGCTTCCTTGTCAAAGCTAAGGCTATACAGTGCCAATGTCCAAAGCAAACTATCCCTTCCAACTGTGAGACTGAGTTCCAGAAAAAAATCCTTTATCTGGAATCTATTGGTATTGACGCTTTCTCTCTTATTGAAAATCATCCAATGCTGATCTCTGTCTCCCTTGCTGACATAAAATCTATAGTGGAGTTGATGACCTCCATGGATTTCAGTGCAATTGAGTTTCGGCGCATTGTTGGCATGTGCCCGGAGGTTCTTACCACCCAAGTATCAGACATCATACCTGTCTTCACCTTCCTCATCCGCGAGGCTCGTGTAAATGGCTCAGAAATGAAGCGAGTAATAAATAGACGACCCAGGTTGCTTGTCTGCAGTGTCAGCAAGGAACTTCGTCCCACCTTATACTTCCTTCAAAGTATTGGCATATATGAGGTAAACAAGCACACTTACTTGCTATCATGTAGTGTTGAAGAAAAGCTTATACCCAGGATCGATTACTTTGAAAATATCGGTTTTTCTCACCTTGATGCAACTTATATGTTTCGAAGATTTCCACAGCTCTTTTGTTACAGCATTAAGAATAATTTGGAGCCTAAATACAATTACTTTGTGATGGAAATGGGAAGAGATCTGAAGGAGCTGAAAGAATTTCCACAGTATTTCTCATTTAGCTTAGAGAACAGGATTAAACCTAGGCATAAACTCTGTGTAGAATTGGGGTTTTGTTTTCCTCTCCCTGTATTGTTAAAGACAAATGAATTGCAATTTCGTAAAAGTTTAGATGTATGTGTAAATTCTTCAATACCCCTGAAAACATCACCACTGTGGTGTTCCAATTGTGAAATTGATGgaacata 1157 0.414 MFALSSRPPFLRPLGHSFEHVLSKATQLSPPSSCIPMASASGTLFSSNTRVFSPNSSSFASSISDHPLSQTPTIPEGLCKPFHSWVPKSVSSSRDSHCKRGFLVKAKAIQCQCPKQTIPSNCETEFQKKILYLESIGIDAFSLIENHPMLISVSLADIKSIVELMTSMDFSAIEFRRIVGMCPEVLTTQVSDIIPVFTFLIREARVNGSEMKRVINRRPRLLVCSVSKELRPTLYFLQSIGIYEVNKHTYLLSCSVEEKLIPRIDYFENIGFSHLDATYMFRRFPQLFCYSIKNNLEPKYNYFVMEMGRDLKELKEFPQYFSFSLENRIKPRHKLCVELGFCFPLPVLLKTNELQFRKSLDVCVNSSIPLKTSPLWCSNCEIDGT 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01116 385 Gene3D Transcription termination factor 3, mitochondrial 182 363 IPR038538 -
Bva09g01116 385 SMART mt_12 212 243 IPR003690 GO:0003690|GO:0006355
Bva09g01116 385 SMART mt_12 278 310 IPR003690 GO:0003690|GO:0006355
Bva09g01116 385 SMART mt_12 311 342 IPR003690 GO:0003690|GO:0006355
Bva09g01116 385 SMART mt_12 244 273 IPR003690 GO:0003690|GO:0006355
Bva09g01116 385 SMART mt_12 141 171 IPR003690 GO:0003690|GO:0006355
Bva09g01116 385 SMART mt_12 176 207 IPR003690 GO:0003690|GO:0006355
Bva09g01116 385 PANTHER CGI-12 PROTEIN-RELATED 115 370 IPR003690 GO:0003690|GO:0006355
Bva09g01116 385 Pfam mTERF 246 356 IPR003690 GO:0003690|GO:0006355
Bva09g01116 385 Pfam mTERF 108 205 IPR003690 GO:0003690|GO:0006355
Bva09g01116 385 PANTHER OS03G0360600 PROTEIN 115 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01116 Bva-Chr9 5827186 5829776 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva09g01116 mTERF 1.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01116 K15032 - gmx:100804440 488.419