Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01114 AtgggaagaggaagaaaaccTTGCTGTGATAAGAATGAAGTGAAGAGAGGCCCTTGGAGCTCTTCAGAGGATCTAAAGCTTATAACTTTCATTCAGAGATATGGCCATGATAACTGGAGGGCTCTCCCAAAAATAGCTGTTCCCACCTTACTTTGTCTATATTGCTCAGGGCTTCAGCGATGTGGGAAAAGTTGTCGTTTGAGATGGATCAACTACCTCAGACCTGATGTGAAGAGAGGAAGCTTTACAGAAGAGGAAGAGGCCACCATCATAAGATTACATGGAGCCTTAGGAAACAAGTGGGCAAAGATTGCATCTCATTTACCTGGTAGGACAGATAATGAGATTAAGAATGTTTGGAACACCCAcctgaagaaaaaattgcaaCCCAAAACTTCAGGATCAAGTGATGAGGAGTTAAAGCAAGAATCAACAATAACTTCCTCTTCACCTTCGTCTTCATCAGTTTCCGATGGGACACCAAACACTGGCAACAGTGCAACTGCTTCTGAATCAAAGCCACTGCCTATGCAGGTTGATTCAGAGAAACAAGTGTCCATGGGAATCAATGGCGGAATCACTGAGGCAATTAAAGAGTCATCATCAGCTTCAACTCTTTCTCAAGATccattaaatatttctaaCTCAAGTGAGCTCAATATGTACAGACCTGAAGAGCCTTCTGTACTGAATTACATGGGGCCTTATGATGTAAACAATACATTAGCTGATGTTGATGAAAAGCCAAATGGTGAGTTTGACATTCCCTCGCTGGATGATAATGACTTCTGGGGCTTCATGGATAGCATAGAATCCATGAACTCTACAGAAAGATCAAATCTTGGAGGAGATTACGGTGCTCAAGAAGCTGACAACAATTGGGTCAATTTCCTTTGGAATGACCTCGGATTAGAGGCTAAAGAGGAGCAAAACCTGGTTCCCTCCCTACCAAAACAGGAACCAGTTGAGTCAGCAACGGATTCTAAACCAATTCATTTTGAGACAGTGGCAAAGTCAGAAGGTCATGATCCAAACATGTTATATCCTCCAACATGGTCCTCTTGGTCTTGGCCTTACAATTCTGGGTTTTG 1091 0.4079 MGRGRKPCCDKNEVKRGPWSSSEDLKLITFIQRYGHDNWRALPKIAVPTLLCLYCSGLQRCGKSCRLRWINYLRPDVKRGSFTEEEEATIIRLHGALGNKWAKIASHLPGRTDNEIKNVWNTHLKKKLQPKTSGSSDEELKQESTITSSSPSSSSVSDGTPNTGNSATASESKPLPMQVDSEKQVSMGINGGITEAIKESSSASTLSQDPLNISNSSELNMYRPEEPSVLNYMGPYDVNNTLADVDEKPNGEFDIPSLDDNDFWGFMDSIESMNSTERSNLGGDYGAQEADNNWVNFLWNDLGLEAKEEQNLVPSLPKQEPVESATDSKPIHFETVAKSEGHDPNMLYPPTWSSWSWPYNSGF 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01114 363 CDD SANT 81 124 IPR001005 -
Bva09g01114 363 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
Bva09g01114 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 73 IPR017930 -
Bva09g01114 363 Pfam Myb-like DNA-binding domain 16 73 IPR001005 -
Bva09g01114 363 Pfam Myb-like DNA-binding domain 79 124 IPR001005 -
Bva09g01114 363 MobiDBLite consensus disorder prediction 199 218 - -
Bva09g01114 363 ProSiteProfiles Myb-like domain profile. 11 73 IPR001005 -
Bva09g01114 363 SUPERFAMILY Homeodomain-like 14 120 IPR009057 -
Bva09g01114 363 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 199 - -
Bva09g01114 363 Gene3D - 8 79 - -
Bva09g01114 363 SMART sant 78 126 IPR001005 -
Bva09g01114 363 SMART sant 15 75 IPR001005 -
Bva09g01114 363 CDD SANT 18 73 IPR001005 -
Bva09g01114 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 128 IPR017930 -
Bva09g01114 363 PANTHER TRANSCRIPTION FACTOR MYB72 1 199 - -
Bva09g01114 363 Gene3D - 80 150 - -
Bva09g01114 363 MobiDBLite consensus disorder prediction 127 181 - -
Bva09g01114 363 MobiDBLite consensus disorder prediction 139 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01114 Bva-Chr9 5815748 5818735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01114 1 190 MYB Transcription Factor Family AT1G56160 56.186 2.21e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva09g01114 Myb_DNA-binding 2.1e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01114 K09422 - jre:118347713 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01114 09 5815748 5818735 Bva09g01114 09 5815748 5818735 ECH