Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01110 ATGGGGAAGAAGGAGAAGCAGAAGATTGTTCTCCCGCCGGAGCTTCCTCCGGAGACCCTGGATGACGAAGTTGAAGTTTCCGATGAGGACCTTGAGTTTGTGAAGGAGAACAGCGAATATGCCGGCTTGTTTTCGACCTTAGACACAACATCAATCACCAAGCATGTCACTCGGGTTGCTAATGCCAAAGAGGACGCTTTGGAGGCTTTGTATGAGCAACGCTCGAGAAAGAAGgctaagaaagaagaaaaagaagaggaaagtgGTCTTGAAGTAGATCGTGTAGATGCTCTTCCTGTGAAGACCTTGGATGGCCAAATTTATTACCGGACAGTTccaaaaacatcaaaatcagaaaatgGTCCGAGTGAAGAGGAAACTGGAGGGGATGATGAGGATGCTAGTGCAGACAAGGGCCTAGTAAAGGTGACTAAGGCAGAAAGGAGACTTAAActtaagaaattgaagaaagaggCAAAGAAACAAGGGAAAGAGGTGGCTCAAACAGAAGTGCAACAACAAAATCCACAAGCAGCAGTACTGGCTGAGGTGAAAGAGGATCTTACAGCTGAGGAGACATTTGAAAGTAAGAAGTGCAAACTTGCAGAGTTGGGAAATGCGTTGCTTACAGACCCAGAGTCCAATATTAAGTTTCTGAAGGAGATGGTGCAAATTTCAAAAGATAACGACCATAGCATTGTCAAACTTGGGCTTCTATCCCTTTTAGCTGTTTTCAGAGACATTATCCCTGGTTATAGGATCAGACTTCCTACTGAAAAGGAACTAGAAATGAAGGTTTCAAAAACCGTCAGAAAGACGCGGTATTATGAATCAACTCTTCTTTCTGCATACAAGGCATACATCCAAAGGCTGATAGCATTGGAAAAGCAGACCTCATTTCAGAATGTTGCAATTCGTTGTGTTTGTACTTTGCTAGATGCACATCCTCATTTCAACTTTCGAGAGAACTTGTTGGGTGCTGTTATTAGCAAAATAAGCTCCACAAATGACACCATAAGGAAACTATGTTGTTCTACAATTAAGTCACTATTTATAAATGAGGGTAAACATGGTGGTGAAGCTACTGTGGAGGCTGTTCGGTTGATTGCTGATCATGTTAAAGCTTATAATTGCCAAATGCATCCCGACTCCATTGAGGTTTTCTTGTCTCTGTCATTTGATGAGGATCTTGGGAAGTCTTCACGGACAGATAAGGATCAAAAAGGTAAAATCAAGGgaaataagaagagaaaaaacttGGAGACGTCAAAGCAATTGCAGGAGAATGACCGAAAGAAAAGTAGGCGAGAACTGATGTCAAAGACAAGAGAAGAGGTTGAAGCTGATTACAAGGCTGCATCTTTTACTCAAGATGTTACAGAGCGGAGACAGATGCAATCTGAAACGCTCTCTGCTGTGTTTGAGACATATTTCCGTATCTTGAAAAATACAAAGGAGTCAATGGTTGCCAGACCTGAAGCAGATCTTGGGTCACCATCTGCTGCAGTTGGATCCCACCCATTGCTGGCTCCTTGTCTGAAAGGGCTAGGGAAATTTTCACATCTGATTGACCTTGATTTTATGGGTGATCTTATGAACCATTTGAAAATTCTAGCTTCTGGTGGTAGCAACTCAGGCGATACTTCTGAGAAATCTCCTAAATATCTGACTGTATCTGAGCGTCTCCAATGCTGTATTGTTGCTTTTAAAGTGATGAGGAACAATCTTGATGCCTTGAAGGTTGATTTACAGGACTTCTTCGTTCATCTTTACAATCTTATACTTGAATACAGGCCAGCAAGAGATCAAGGTGAGGTGTTAGCAGAAGCTCTGAAGATTATGTTGTGTGAAGATAAACAACATGACATGCAAAAGACTGCTGCATTTGTAAAACGTTTGGCTACATTAGCACTGCACTTGGGATCTGCAGAATCCATGGCTGCCTTGGTAGCAGTAAAGCAGCTCCTTCTGAAGAATGTGAAGTGCAGAAATCTATTGGAAAATGATACAGGAGGAGGCTCAGTTTCAGGCATGATTGCGAAATATCAACCATATTCCACGGACCCCAATTTAAGCGGCGCTCTTGCATCGGTACTTTGGGAACTCAGTCTTTTGTCCAGGCACTATTATCCGGCTATATCAACAATGGCTTCAAGCATTTCAACCATGAGTAGTTCTCCTAACCAAGTCTTTCTCTCTGTTGTCTCGCCCCAACAAGCTTTCAAGGACTTTTCCCTTGAGAAAGAATCATTTGCATCACAAAGCGGCATCTCCAAATTAAATGTCAAGAGGAAGAGAGGAAATGATTCTTCCACATCATCTGGCATCAAGTCTGCATCAGTTTCGAGTTCGTTCGATGAGGATGAGGTTCGAAGGAAACTTTCTGACCATTTTACGATTCTTGCTGACATTAAGAAGAATGAAAGATTGAGAAGAGAGCTGGATAGAACTAATTTGGAACTACAGCTTTATGAAcaatataagaaacaaaagatgCAAAGATCAAAAGCAGCTGCATG 2519 0.4049 MGKKEKQKIVLPPELPPETLDDEVEVSDEDLEFVKENSEYAGLFSTLDTTSITKHVTRVANAKEDALEALYEQRSRKKAKKEEKEEESGLEVDRVDALPVKTLDGQIYYRTVPKTSKSENGPSEEETGGDDEDASADKGLVKVTKAERRLKLKKLKKEAKKQGKEVAQTEVQQQNPQAAVLAEVKEDLTAEETFESKKCKLAELGNALLTDPESNIKFLKEMVQISKDNDHSIVKLGLLSLLAVFRDIIPGYRIRLPTEKELEMKVSKTVRKTRYYESTLLSAYKAYIQRLIALEKQTSFQNVAIRCVCTLLDAHPHFNFRENLLGAVISKISSTNDTIRKLCCSTIKSLFINEGKHGGEATVEAVRLIADHVKAYNCQMHPDSIEVFLSLSFDEDLGKSSRTDKDQKGKIKGNKKRKNLETSKQLQENDRKKSRRELMSKTREEVEADYKAASFTQDVTERRQMQSETLSAVFETYFRILKNTKESMVARPEADLGSPSAAVGSHPLLAPCLKGLGKFSHLIDLDFMGDLMNHLKILASGGSNSGDTSEKSPKYLTVSERLQCCIVAFKVMRNNLDALKVDLQDFFVHLYNLILEYRPARDQGEVLAEALKIMLCEDKQHDMQKTAAFVKRLATLALHLGSAESMAALVAVKQLLLKNVKCRNLLENDTGGGSVSGMIAKYQPYSTDPNLSGALASVLWELSLLSRHYYPAISTMASSISTMSSSPNQVFLSVVSPQQAFKDFSLEKESFASQSGISKLNVKRKRGNDSSTSSGIKSASVSSSFDEDEVRRKLSDHFTILADIKKNERLRRELDRTNLELQLYEQYKKQKMQRSKAAA 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01110 839 PIRSF Noc3 1 818 IPR016903 -
Bva09g01110 839 MobiDBLite consensus disorder prediction 1 20 - -
Bva09g01110 839 Pfam Nucleolar complex-associated protein 197 287 IPR011501 -
Bva09g01110 839 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 3 782 IPR016903 -
Bva09g01110 839 Coils Coil 67 87 - -
Bva09g01110 839 Coils Coil 807 827 - -
Bva09g01110 839 MobiDBLite consensus disorder prediction 398 445 - -
Bva09g01110 839 Coils Coil 417 437 - -
Bva09g01110 839 Coils Coil 152 172 - -
Bva09g01110 839 MobiDBLite consensus disorder prediction 72 94 - -
Bva09g01110 839 SUPERFAMILY ARM repeat 213 660 IPR016024 -
Bva09g01110 839 MobiDBLite consensus disorder prediction 109 140 - -
Bva09g01110 839 Pfam CBF/Mak21 family 562 717 IPR005612 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01110 1 814 Core DNA Replication Machinery Family AT1G79150 60.147 0.0 928
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01110 K14834 - gmx:100794797 1148.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01110 09 5785002 5791434 Bva09g01110 09 5785002 5791434 ECH