Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01107 ATGGCCAAGTCTTCTTCGACGGCACTGCTAGGTTTTGCAGTTGCTGCTGTTTCTGTGTTCAGcttcttggtcaacttagcaCAAGCTCAACATGCAACTGCTGCCACAGATCCTTCTGAAGCGAGAGCTTTGAATTCAATCTTCACCAAATGGGGGATATCAGCATCTACTGTACAATCAGCTGGATGGAATATAAGCGGTGAGCTATGCAGCGGAACAGCTATTGACGACACCACAATTGATAACACAACCTACAGCCCCTTAATCAAATGCACTTGTTCTTTTAACAACGACACTACATGCCGCATCGCAGCATTGAAGGTTTATGCTTTGGATGTGAGTGGTGAAATCCCAGAAGAGCTATGGACTCTAACTTACCTCACCAATTTGAATCTGGGACAGAATTACTTGACTGGTTCTCTACCTCCTGCAATTGGAAACCTTACTCGCATGCAATACTTGTCCTTTTACATCAATGCGTTATCAGGGGAGCTTCCAAAGGAACTTGGAAATCTTACCGAGTTAATAGAATTGGGTTTTGGGTCAAACAGATTCAATGGTCCTCTCCCATCTGAACTTGGGAAGCTggtgaaattagaaaaactATACATGGATAGTTCGGGAGTTAGTGGTCCAATTCCTTcaacatttaaaaatcttataaaccTTCGCATTGTATGGGCTTCAGATGTGGACTTCACAGGCAGGATACCTGACTTTATAGGGAACTGGACTAAACTGGAAGCCCTGTGGTTTCAGGGTAATTCCTTTGAAGGCTCAATACCCAATTCATTTTCCAATTTGACTTCTATGATGCGGTTGGGAATCAGTGGCTTATCTAATGGGAGTTCCACCCTGGAATTTATTAGGAATATGAAGTCTTTGACTAAATTAGAACTGAGGAATGATAATATTTCTGGTCCAATTCCGTCCTATATTGGTGAATTTTCGGGTTTGACACAGCTaaCAAAGCATCAAAGAGGTGATGACAAAGGGCTCTTAGGTATTGACACGAAGCTGTGTACTTTCAGCTATCTTGAGTTAAGGAATGCTACAAATGATTTTAATCTTGACAACAAGCTTGGAGAGGGAGGTTTTGGACAAGTTTACAAGGGGACACTCAATGATGGAAGAGTAATTGCTGTGAAACAACTACATGCAGGATCCCATCAAGGAACAAGTCAATTCATAAATGAGATTACTACCATATCTGCTGTGCAACATCGTAACCTTGTTGAGTTATATGGATGTTGCATTGAAGGAGATAAAAGACTTATTGTCTATGAATATCTAGAAAACAAGAGTCTTGATCAAGCATTATTTGGAAATTGTTTAAATCTCAATTGGACTACACGCTACAATATTTGTGTAGGCGTAGCAAGAGGATTAGCATATCTTCATGAGGAGTCACGGCTCCGTATTGTGCATCGTGATGTGAAATCTAGTAATATTCTGCTTGATTATGCACTTGTCCCTAAAATATCCGATTTTGGATTGGCCAAGttatatgataatgagaagacCCATATAAGCACCCAAGTTGCGGGTACAATTGGATATCTAGCACCGGAGTATGCTTTGCGTGGCAGTCTTACTGAGAAAGCAGATGTCTTTTCCTTTGGTGTTGTGGTTCTGGAGATAATTTGTGGCAGGCGAAATTCTGATTTAAGTttagaagaagagaaggtgTATCTTCTGGAATGGGCTTGGAATCTGTTTGAAAACAACCGTGTAATTGAGTTGGTAGATCCTAGGCTATCAGAATTCAACGAAGAAGAGGTTAAGAGAATTGTAGGGGTAGCTCTTTTGTGCACTCAAACATCACCAGCATTACGACCATCGATGTCTCGTGTGGTGGCAATGCTCTCTGGAGATATTGAAGTGGGCCCTGTAACTTCAAGGCCAGTATACTTTACTGACTGGAATTTTGATGATGCGACCAGCTTAATGGCTGACGTAGCTACTAATGGAGCAAATACAAGTTATTACATCTCAGCATCAACAAATTCCAGTGTTGTGGGCAGTGCAGAGATTTCACAAATGAATTCTAAACCCATTATTGATAGTTCTATCGGTAAGAAATG 2084 0.3944 MAKSSSTALLGFAVAAVSVFSFLVNLAQAQHATAATDPSEARALNSIFTKWGISASTVQSAGWNISGELCSGTAIDDTTIDNTTYSPLIKCTCSFNNDTTCRIAALKVYALDVSGEIPEELWTLTYLTNLNLGQNYLTGSLPPAIGNLTRMQYLSFYINALSGELPKELGNLTELIELGFGSNRFNGPLPSELGKLVKLEKLYMDSSGVSGPIPSTFKNLINLRIVWASDVDFTGRIPDFIGNWTKLEALWFQGNSFEGSIPNSFSNLTSMMRLGISGLSNGSSTLEFIRNMKSLTKLELRNDNISGPIPSYIGEFSGLTQLTKHQRGDDKGLLGIDTKLCTFSYLELRNATNDFNLDNKLGEGGFGQVYKGTLNDGRVIAVKQLHAGSHQGTSQFINEITTISAVQHRNLVELYGCCIEGDKRLIVYEYLENKSLDQALFGNCLNLNWTTRYNICVGVARGLAYLHEESRLRIVHRDVKSSNILLDYALVPKISDFGLAKLYDNEKTHISTQVAGTIGYLAPEYALRGSLTEKADVFSFGVVVLEIICGRRNSDLSLEEEKVYLLEWAWNLFENNRVIELVDPRLSEFNEEEVKRIVGVALLCTQTSPALRPSMSRVVAMLSGDIEVGPVTSRPVYFTDWNFDDATSLMADVATNGANTSYYISASTNSSVVGSAEISQMNSKPIIDSSIGKK 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01107 694 PANTHER BNAC03G71060D PROTEIN 329 668 - -
Bva09g01107 694 Gene3D Ribonuclease Inhibitor 37 339 IPR032675 -
Bva09g01107 694 Gene3D Phosphorylase Kinase; domain 1 340 430 - -
Bva09g01107 694 Pfam Protein tyrosine and serine/threonine kinase 356 622 IPR001245 GO:0004672|GO:0006468
Bva09g01107 694 Gene3D Transferase(Phosphotransferase) domain 1 431 628 - -
Bva09g01107 694 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
Bva09g01107 694 SUPERFAMILY Protein kinase-like (PK-like) 338 622 IPR011009 -
Bva09g01107 694 ProSiteProfiles Protein kinase domain profile. 355 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01107 694 Pfam Leucine Rich Repeat 246 268 IPR001611 GO:0005515
Bva09g01107 694 SMART serkin_6 355 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01107 694 CDD STKc_IRAK 361 622 - -
Bva09g01107 694 PANTHER BNAC03G71060D PROTEIN 139 323 - -
Bva09g01107 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Bva09g01107 694 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 329 668 - -
Bva09g01107 694 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 139 323 - -
Bva09g01107 694 SUPERFAMILY L domain-like 98 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01107 Bva-Chr9 5739594 5752391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01107 316 648 Receptor kinase-like Gene Family AT1G56120 68.343 4.87e-159 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva09g01107 PK_Tyr_Ser-Thr 4.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01107 - - gmx:100798233 553.903