Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01105 ATGTCTGCGGCTTCCAAGAATGCCTCGACCTCAGAGTCACACTCCACCATTCTGGAACCACCAAAACCCAATTCCCCAACTGCCGAATTGCAGAAACTTGGGGCTGCCACCCGGCTGGATGGCAGAAACTATCTCCAATGGGCACGATTAGTGACACTGGCTCTTAAGGGGAAACAGAAACTCCACCATCTTACTGAAGACCCACCCAATAGCCTAGATGAGAAGTACTCGGCCTGGGACATGGAGGACACCATCATTATGACCTGGTTGTTGAACTCAATGCAActtgaaatttctcaaaatttcatGTTCCTAGAGACATCAAAGCAGATTTGGGAAATGGTCAAAAAGACCTATTCGAAGGCACAAGATGTAGCTGTTGTATATGAGTTAAAAATTCGGATTGCAAATACCAAGCAAGGTAATCTTTCGGTTACAGAATACTATAATTTATTGACCAACTTGTGGCAAGAAATGGATATGTACCGAAAACTGAAGGTGAGTGAAGATACTCAAGTCATTCTCCGAGAAAGGGAGCAAGATCGAGTGTTCGAATTCCTGGCTGGTTTAAATGAAGCATTTGATCATGTTCAGGTTCAAATTCTGGGAAGAGAAACTTTACCCAACCTGAATGAGACATTCTATTTGACCCGAGGAGAGGAAAGTCGTCGTGCTGTCATGCTAGACAGCACCTCCAATGCTGACACAGCCCTCATTGCTGAAAGGAGGGACAACCGAGGGTCCAAAACTGATTCAGTCTTCACTGCTGCAAGAAGGGACAACCGGGGGTCCAAATCAGACTCCACCAAAGCTTCCAACCGTGATAATTTGTGGTGCACTCATTGCAAAAAGCCCAGACACACACGAGAGACCTGTTTCAAATTACATGGCAAGGAACAAGTCTTGAACCGAATCAAACAACAACGCACACAAGCAAACCTCGCAGCCACAGAACAACCAGCATCTCCTGGAAATAATGCCCTTCCATCCCTTAATGAAGCAGAGGTTGAGAAACTGCGAGCTTTCCTTGAAACCTTGACTACTAGCTCATGCTCTCTTGCTCAGTCAGTCCCAACCGAGTCATTCCCATCTGACAATGATCACATTTCTGGTTCTGGAACTCCAACAGATACAAATGAACCTACTCCAGAACCCAAAGAACCACTCAAAGGAACACTAGATGATGGAACTGGAAGAGTGATTGCTGTGAAACAACTATCTGTAGGATCCCATCAAGGAAAAAGTCAATTCATAGCTGAGATTGCTACCATATCTGCAGTGCAACATCGTAATCTGGTTAAGTTATATGGATGTTGCATTGAAGGAGATAATAGACTTCTTGTCTATGAATATCTTGAAAACAAGAGTCTTGATCAAGCATTATTTGGAAATTCTTTAAATCTCAATTGGACTACACGCTTTGATATTTGCATGGGCGTAGCAAGAGGATTAGCATACCTTCATGAAGAGTCACGGCTTCGTATTGTACACCGTGATGTGAAGGCTAGTAATATTCTGCTTGATCATGAGCTTGTCCCTAAAATATCTGATTTTGGTTTGGCCAAATTATATGATGATAAGATGACCCATATAACAACCCGTGTGGCAGGGACAATTGGATATCTTGCACCGGAGTATGCCGTGCGTGGCCATCTTACTGAGAAAGCAGATGTGTTTTCCTTTGGTGTTGTGGCTCTGGAGATAATCAGTGGCAGGCTTAATTCTGATTCAAGCTTAGAAGGAGAAAAGATGTATCTTCTGGAATGGGCTTGGGATCTGTTTGAAAACAAACGTGTAATCGAGCTGGTAGATCCTAGGCTATCAGAATTCAACGAGGAAGAGGTGAAGAGAATTGCAGGGGTAGCTCTTCTGTGCACTCAAACTTCACCAGCATCTCGGCCATCAATGTCTCGTGTGGTGGCAATGCTCTCTGGAGATATTGAAGTGAGCCCTGCAACTTCAAGACCAGGATACTTGACTGACTGGAAATTTGATGATGTGAGTCATGTGACCAGCTTAATGACTGACGTAGCAACTAAAGGATCAAACACAAGTCATTACAGCACAACATCAACAGACGTCAGTGTGCTTTCACCAGTTACTCTTTCTAAACCCATTATTGATGGGTCTGAGGGCAGGTA 2141 0.4362 MSAASKNASTSESHSTILEPPKPNSPTAELQKLGAATRLDGRNYLQWARLVTLALKGKQKLHHLTEDPPNSLDEKYSAWDMEDTIIMTWLLNSMQLEISQNFMFLETSKQIWEMVKKTYSKAQDVAVVYELKIRIANTKQGNLSVTEYYNLLTNLWQEMDMYRKLKVSEDTQVILREREQDRVFEFLAGLNEAFDHVQVQILGRETLPNLNETFYLTRGEESRRAVMLDSTSNADTALIAERRDNRGSKTDSVFTAARRDNRGSKSDSTKASNRDNLWCTHCKKPRHTRETCFKLHGKEQVLNRIKQQRTQANLAATEQPASPGNNALPSLNEAEVEKLRAFLETLTTSSCSLAQSVPTESFPSDNDHISGSGTPTDTNEPTPEPKEPLKGTLDDGTGRVIAVKQLSVGSHQGKSQFIAEIATISAVQHRNLVKLYGCCIEGDNRLLVYEYLENKSLDQALFGNSLNLNWTTRFDICMGVARGLAYLHEESRLRIVHRDVKASNILLDHELVPKISDFGLAKLYDDKMTHITTRVAGTIGYLAPEYAVRGHLTEKADVFSFGVVALEIISGRLNSDSSLEGEKMYLLEWAWDLFENKRVIELVDPRLSEFNEEEVKRIAGVALLCTQTSPASRPSMSRVVAMLSGDIEVSPATSRPGYLTDWKFDDVSHVTSLMTDVATKGSNTSHYSTTSTDVSVLSPVTLSKPIIDGSEGR 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01105 713 Gene3D Phosphorylase Kinase; domain 1 359 451 - -
Bva09g01105 713 ProSiteProfiles Protein kinase domain profile. 364 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01105 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672|GO:0006468
Bva09g01105 713 MobiDBLite consensus disorder prediction 1 27 - -
Bva09g01105 713 MobiDBLite consensus disorder prediction 1 22 - -
Bva09g01105 713 MobiDBLite consensus disorder prediction 308 329 - -
Bva09g01105 713 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 396 692 - -
Bva09g01105 713 MobiDBLite consensus disorder prediction 355 380 - -
Bva09g01105 713 MobiDBLite consensus disorder prediction 355 395 - -
Bva09g01105 713 PANTHER BNAC03G71060D PROTEIN 396 692 - -
Bva09g01105 713 Pfam Retrotransposon gag protein 88 192 IPR005162 -
Bva09g01105 713 MobiDBLite consensus disorder prediction 243 273 - -
Bva09g01105 713 Gene3D Transferase(Phosphotransferase) domain 1 452 652 - -
Bva09g01105 713 SUPERFAMILY Protein kinase-like (PK-like) 390 643 IPR011009 -
Bva09g01105 713 SMART serkin_6 337 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01105 713 MobiDBLite consensus disorder prediction 243 269 - -
Bva09g01105 713 CDD STKc_IRAK 390 643 - -
Bva09g01105 713 Pfam Protein tyrosine and serine/threonine kinase 395 643 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01105 Bva-Chr9 5722203 5728617 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01105 390 685 Receptor kinase-like Gene Family AT1G56120 71.044 5.53e-141 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva09g01105 PK_Tyr_Ser-Thr 2.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01105 - - lja:Lj3g3v0424180.1 506.523