Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01101 ATGGCCAAGTCTTCTTCGACAGCAGTGGTGGGTTTTGCAGTTGCTGCTATTTTAGAGTTCAGCTTCTTCGTTAACTTAGCACAAGCTCAACATGCAACTGCTACCACAGATACTTCTGAAGCGAGAGCTTTGAATTCAATCTTCACCAAATGGGGGATATCAGCATCTACTGTACAATCAGCTGGATGGAATGTAAGCGGTGAGCTATGCAGCGGAAGAGCCATTGACGACACCACAATTGATGACACCACCTACAACCCCTTAATCAAATGCACTTGTTCCTTTAACAACGCCACTACCTGCCGCATCACAGCATTGAAGGTTTATGCTTTGGATGTGAGTGGTGAAATCCCAGAAGAGCTATGGACTCTAACTTACCTCACCAATTTGAATCTGGAACAGAATTACTTGACTGGTTCTCTACCTCCTGCAGTTGGAAACCTTTCTCGCATGCAATACTTGTCCTTTTACATCAATGCGTTATCAGGGGAGCTTCCAAAGGAACTCGGAAATCTTACCGAGTTAATAGAATTGGCTTTTGGGTCAAACAGATTCAATGGTCCTCTCCCATCTGAACTTGGGAAGCTGGTGAAATTAGAACAACTATACATGGATAGTTCGGGAGTTAGTGGTCCAATTCCTTCaacatttaaaaatctaaaaaaccTTGGCACTGTATGGGCTTCAGACGTGGCATTTACAGGCAGGATACCTGACTTTATAGGGAACTGGACTAAACTGAAATTCCTGTGGTTTCAGGGTAATTCTTTTGAAGGCTCAATACCCACATCATTTTCCAATTTGACTTCTCTGACGCAGTTGGGAATCAGTGGCTTATCTAATGGGAGTTCCTCCCTGGAATTTATTAGGAATATGAAGTCTTTGACTATATTAGAACTGAGGAATGATAATATTTCTGGTCCAATTCCGTCCTATATTGGTGAATTTTCAAGTTTGACACAGCTGGACTTAAGCTTCAATAGTATCACAGGAGAGATTCCAGGCTCACTTTTCACCTTGAGTCAGCTTCTTTATATGTCTCTTGGAAACAACAAAGTTAATGGTACACTCCCTACTCAGAAAAGTCCGTATCTTGTCTATATAGACTTGTCATACAACAACTTATCGGGCAGCTTCCCTTCTTGGGTCAATGAACAAGGTTTACAACTCAATTTAGTTGCCAACAACTTCACAATAGAAAGTTCAAACAGCAGTGATTTGCCATTTGGACTCAGCTGTCTCCAGCAAAATTTTCCCTGCAATCGTGTCAGTGCAAGATATGATAACTTTGCGATCAAGTGTGGTGGTCCTCAAATTACATCCTCAAAAGGAGTTGTaaCAAAGCATCAAAGAGGTGATGACAAAGGGCTTTTAGGTATTGATACGAAGCTGTGTACTTTCAGCTATTTTGAGTTAAGGAATGCTACAAAAGATTTTAATCTTGACAACAAGCTTGGAGAGGGAGGTTTTGGACAAGTTTACAAGGGGACACTCAATGATGGAAGAttatatgataatgagaagacCCATATAAGCACCCGGGTTGCGGGTACAATTGGATATCTAGCACCGGAGTATGCCTTGCGTGGCCTTCTTACTGAGAAAGCAGATGTGTTTTCCTTTGGTGTTGTGGCTCTGGAGATAATTTGTGGCAGGCCAAATTCCGATTCAAGTttagaagaagagaaggtgTATCTTCTGGAATGGGCTTGGAATCTGTTTGAAAACAAACGTGTAATTGAGCTGGTAGATCCTAGGCTATCAGAATTCAACGAAGAAGAGGTTAAGAGAATTGTAGGGGTAGCTCTTTTGTGCACTCAAACATCACCAGCATTACGACCATCGATGTCTCGTGTGGTGGCAATGCTATCTGGAGATATTGAAGTGGGCCCTGTAACTTCAAGGCCAGTATACTTTACTGACTGGAATTTTGATGATATGACCAGCTTAATGACTGACGTTGCAACTAAAGGATCAAACACAAGTTTTTACATCTCATCATCAACAAATACCAGTGGTGTGGGCAGTGCAGAGATTTCACAAATGAATTCTAAACCCATTATTGATAGTTCTATCGGTAAGAAATG 2087 0.4063 MAKSSSTAVVGFAVAAILEFSFFVNLAQAQHATATTDTSEARALNSIFTKWGISASTVQSAGWNVSGELCSGRAIDDTTIDDTTYNPLIKCTCSFNNATTCRITALKVYALDVSGEIPEELWTLTYLTNLNLEQNYLTGSLPPAVGNLSRMQYLSFYINALSGELPKELGNLTELIELAFGSNRFNGPLPSELGKLVKLEQLYMDSSGVSGPIPSTFKNLKNLGTVWASDVAFTGRIPDFIGNWTKLKFLWFQGNSFEGSIPTSFSNLTSLTQLGISGLSNGSSSLEFIRNMKSLTILELRNDNISGPIPSYIGEFSSLTQLDLSFNSITGEIPGSLFTLSQLLYMSLGNNKVNGTLPTQKSPYLVYIDLSYNNLSGSFPSWVNEQGLQLNLVANNFTIESSNSSDLPFGLSCLQQNFPCNRVSARYDNFAIKCGGPQITSSKGVVTKHQRGDDKGLLGIDTKLCTFSYFELRNATKDFNLDNKLGEGGFGQVYKGTLNDGRLYDNEKTHISTRVAGTIGYLAPEYALRGLLTEKADVFSFGVVALEIICGRPNSDSSLEEEKVYLLEWAWNLFENKRVIELVDPRLSEFNEEEVKRIVGVALLCTQTSPALRPSMSRVVAMLSGDIEVGPVTSRPVYFTDWNFDDMTSLMTDVATKGSNTSFYISSSTNTSGVGSAEISQMNSKPIIDSSIGKK 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01101 695 SUPERFAMILY L domain-like 100 385 - -
Bva09g01101 695 SUPERFAMILY Protein kinase-like (PK-like) 462 504 IPR011009 -
Bva09g01101 695 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 442 502 - -
Bva09g01101 695 Gene3D Ribonuclease Inhibitor 37 282 IPR032675 -
Bva09g01101 695 Pfam Protein tyrosine and serine/threonine kinase 505 623 IPR001245 GO:0004672|GO:0006468
Bva09g01101 695 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 502 669 - -
Bva09g01101 695 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 442 502 - -
Bva09g01101 695 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 141 415 - -
Bva09g01101 695 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 141 415 - -
Bva09g01101 695 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 502 669 - -
Bva09g01101 695 Gene3D Transferase(Phosphotransferase) domain 1 477 635 - -
Bva09g01101 695 ProSiteProfiles Leucine-rich repeat profile. 318 340 IPR001611 GO:0005515
Bva09g01101 695 Gene3D Ribonuclease Inhibitor 283 406 IPR032675 -
Bva09g01101 695 SUPERFAMILY Protein kinase-like (PK-like) 507 654 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01101 Bva-Chr9 5674355 5684738 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01101 502 649 Receptor kinase-like Gene Family AT1G56120 71.622 1.52e-63 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva09g01101 PK_Tyr_Ser-Thr 1.6e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01101 - - lang:109352863 595.89