LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva09g01100	ATGATCAAGTTGAAGATGAATATGGTGAAGTCTTCAACAATTCTGGGTTTCGCAGTTCTAGTCTTCAGCTTGTTGATTAACTTAGCACAAGCTCAACGTGCAAACGCCACCACAGATCCTTCTGAAGCGATAGCTTTGAATTCAATCTTCAACAAATGGGGGTTATCATCAGCATCGTCAAATGGATGGAATGTAAGCGGTGAGCTATGCAGCGGAACAGCCACAGATATCAACATCCCAATTGATGGCAGCAGTTACAATCCATTTATCAAATGCAATTGTTCCTTTATCAACGCCACTACTTGCCGCATTACAGCGTTAAAGGTTTATGCTTTGGATGTGATTGGTGAAATCCCAGATGAGCTATGGACTCTAACTTACCTCACCAGTTTAAATCTGGGCCAGAATTACTTGACAGGTTCCCTACCTCCTGCAATTGGAAGCCTTACTCGCTTGCAATATATGGGCCTTGGCATCAATGCCTTATCAGGGGAGCTTCCAAAGGAACTCGGAAATCTCACCGAGTTAATATCCTTGGTTTTTGCGTCAAACAGATTCAGTGGTTCTCTCCCATCTGAACTTGGGAATCTGGAAAAATTAGAACAACTTCCGCTTGTTATAATGATTGATGAGGCTTCTCAGTTGCATCTACAGAATTCAGAATCTGGTTTTGGACTATGCCGAGCATACTTTGATAGTTCAGGAGTCAGTGGTCCAATTCCTTCAACATTTGCAAATCTGAAAAACCTGGGCATTGTATGGGCTTCAGACGTGGCATTCACTGGTAGGATACCTGACTTTATAGGAAACTGGACTAAGCTGTCAGTCTTGAGGTTTCAGGGTAATTCTTTTGAAGGTTCAATACCTGCATCATTTTCCAATTTGACTTCTCTGACAGAGTTGAGAATAAGTGGCTTATCTAATGGGAGCTCCTCACTGGAATTTATAAGGAATATGACGTCTTTGACTATCTTAGATCTGAGGACTAATAATATATCTGGTTCAATTCCGTCCCATATTGATGAACTTTATGATTTGACACAGCTgGATTTAAGCTTCAATAATATCACAGGAGAGATTCCAGGCTCGCTTTTCAGCTTAAGACAACTTTCTCATGTGTTTCTTGGAAATAACAAACTCAGTGGTACCCTCCCTACCGAGAAAAGTGACTCTCTTCGCTATATAGACTTGTCATACAACTACCTATCAGGGAGCTTCCCTTCTTGGGTCTACCAACGAGATTTTCAACTCAATTTAGTTGCCAACAACTTCACAATAGAAGGTTCAAATAACAGTGGTTTGCCTTCTGGACTCAACTGTCTCCAGCGAAATTTTCCTTGTAATGGTGGCATCAGAAGACATCATGACTTTGCAATCAAGTGTGGCGGTCCTCAAATTAAATCCTCATATGGAGTTGTATATGAAAGGGATGATGGGGCACTTGGTCCAGCAACATATTTTGTTACTGATACAGTGCAATCCCAGATTTCATTCCCTCTaagaaagcatcaaagaggTGATGATGAAGAACTCATATTGATACAAAACACTTTCAGCTATTCTGAGTTAAAGAATGCTACAGATGATTTTAATCTTGACAACAAGCTTGGAGAGGGAGGTTTTGGACCCGTTTATAAGGGGACACTAGACGATGGAAGAGTGATTGCTGTGAAACAACTATCTGCAGGATCCCATCAAGGAAAAAGTCAATTCATAAATGAGATTGCTACCATATCTGCAGTGCAACATCGTAATCTTGTTAAATTATGTGGATGTTGCATTGAAGGAGATAAAAGACTTCTTGTCTATGAATATCTAGAAAATAAGAGTCTTGATAAAGCATTATTTGGAAATGGTATAAATCTCAGTTGGACTACACGCTATGATATCTGCTTGGGCATAGCAAGAGGATTAGCATATCTTCATGAGGAGTCACGGCTCCGTATTGTGCACCGTGATGTGAAGGCTAGTAATATTTTGCTTGATCATGAGCTTGTTCCTAAAATATCTGATTTTGGTTTGGCTAAATTATATGATGATAAGAAGACGCATATAAGCACATGTGTGGCGGGGACAATTGGATATCTTGCACCGGAGTATGCCTTGCGTGGTCATCTTACTGAGAAAGCAGATGTATTTTCCTTTGGTGTTGTGGCTCTAGAGATCATTAGTGGCAGGCCTAATTCTGATTTGAGTTTAGGAGGAGAGAAGGCATATCTTCTGGAATGGGCTTGGAATCTGTTTGAAAACAACCGTGTAATCGAGCTGGTAGATCCTAGGCTATCAGAATTCAACGAAGAAGAAGTTAAGAGAATTGCAGGGGTAGCTCTTTTGTGCACTCAAACATCACCAGCATTACGACCATCAATGTCGCGTGTGGTGGCAATGCTTTCTGGAGATATTGAGGTGAGCCCTGCAACTTCGAGGCCAGTATACTTTACTGACTGGAATTTTGATGATGTGACCAGCTTAATCACTGACGTTGCTACTAGTGGAGCAAATACAAGTCATTACACCTCATCATCAGCAAGTTCCAACACTGTGGGCAGCACAGAGTTTCCACCAGTGAATCCTTCTAAACCAATTCTTGCTATGTCTCTTGAGCGTAGTTA	2612	0.4077	MIKLKMNMVKSSTILGFAVLVFSLLINLAQAQRANATTDPSEAIALNSIFNKWGLSSASSNGWNVSGELCSGTATDINIPIDGSSYNPFIKCNCSFINATTCRITALKVYALDVIGEIPDELWTLTYLTSLNLGQNYLTGSLPPAIGSLTRLQYMGLGINALSGELPKELGNLTELISLVFASNRFSGSLPSELGNLEKLEQLPLVIMIDEASQLHLQNSESGFGLCRAYFDSSGVSGPIPSTFANLKNLGIVWASDVAFTGRIPDFIGNWTKLSVLRFQGNSFEGSIPASFSNLTSLTELRISGLSNGSSSLEFIRNMTSLTILDLRTNNISGSIPSHIDELYDLTQLDLSFNNITGEIPGSLFSLRQLSHVFLGNNKLSGTLPTEKSDSLRYIDLSYNYLSGSFPSWVYQRDFQLNLVANNFTIEGSNNSGLPSGLNCLQRNFPCNGGIRRHHDFAIKCGGPQIKSSYGVVYERDDGALGPATYFVTDTVQSQISFPLRKHQRGDDEELILIQNTFSYSELKNATDDFNLDNKLGEGGFGPVYKGTLDDGRVIAVKQLSAGSHQGKSQFINEIATISAVQHRNLVKLCGCCIEGDKRLLVYEYLENKSLDKALFGNGINLSWTTRYDICLGIARGLAYLHEESRLRIVHRDVKASNILLDHELVPKISDFGLAKLYDDKKTHISTCVAGTIGYLAPEYALRGHLTEKADVFSFGVVALEIISGRPNSDLSLGGEKAYLLEWAWNLFENNRVIELVDPRLSEFNEEEVKRIAGVALLCTQTSPALRPSMSRVVAMLSGDIEVSPATSRPVYFTDWNFDDVTSLITDVATSGANTSHYTSSSASSNTVGSTEFPPVNPSKPILAMSLERS	870

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva09g01100	870	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	506	843	-	-
	Bva09g01100	870	Gene3D	Phosphorylase Kinase; domain 1	492	605	-	-
	Bva09g01100	870	SUPERFAMILY	Protein kinase-like (PK-like)	515	831	IPR011009	-
	Bva09g01100	870	Gene3D	Ribonuclease Inhibitor	39	208	IPR032675	-
	Bva09g01100	870	SMART	serkin_6	530	797	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bva09g01100	870	SUPERFAMILY	L domain-like	101	413	-	-
	Bva09g01100	870	PANTHER	BNAC03G71060D PROTEIN	139	449	-	-
	Bva09g01100	870	PANTHER	BNAC03G71060D PROTEIN	506	843	-	-
	Bva09g01100	870	Pfam	Leucine rich repeat	321	380	IPR001611	GO:0005515
	Bva09g01100	870	ProSiteProfiles	Leucine-rich repeat profile.	345	367	IPR001611	GO:0005515
	Bva09g01100	870	MobiDBLite	consensus disorder prediction	833	854	-	-
	Bva09g01100	870	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	649	661	IPR008271	GO:0004672\|GO:0006468
	Bva09g01100	870	Pfam	Protein tyrosine and serine/threonine kinase	531	797	IPR001245	GO:0004672\|GO:0006468
	Bva09g01100	870	Gene3D	Transferase(Phosphotransferase) domain 1	606	807	-	-
	Bva09g01100	870	MobiDBLite	consensus disorder prediction	833	870	-	-
	Bva09g01100	870	Gene3D	Ribonuclease Inhibitor	213	442	IPR032675	-
	Bva09g01100	870	CDD	STKc_IRAK	536	797	-	-
	Bva09g01100	870	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	139	449	-	-
	Bva09g01100	870	ProSiteProfiles	Protein kinase domain profile.	530	812	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva09g01100	Bva-Chr9	5655094	5665148	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva09g01100	501	869	Receptor kinase-like Gene Family	AT1G56120	65.241	4.85e-158	483

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Bva09g01100		PK_Tyr_Ser-Thr	8.2e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva09g01100	-		-	zju:107418078	912.909