Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01096 ATGACCTCAATGCTcagaacaagaaaaatcaccaatttttcttcaagtcTTAGAAGTTCTCAGCTAATTTCTCATGAACTCAATGCAAATCCGCAGCCAATACAATTTCCTTCCTACCCTTTTTCTGCTGCCCTCAAAAACTTAAACCCTTTTAGGGTTTTGCTCTTCTATGCTTCGTTTTCAACTCAAGCATCCAAATTTCCAGAATATGAGATGCCCTCTGTGACCTGGGGCGTGATTCAGGGCAGAAAAGAGAAACTCGTTTCGCGGGTAATAATCTTTGACTATCTGAAGGGTTTAGGGATTATTCCTGATGAATTGCAAGACGTGGAAGTGCCTTCTGCTGTTGAGGTCATGAAGGAGCGTGTTGAGTTCCTTCAGAGGTTGGGGTTAACCATTGATGATATTAACGAATACCCTTTAATGCTTGGGTGTAGTGTGAGAAAGAATATAATACCTGTGTTAGGGTACTTAGAAAAGATTGGGATTCCAAGGTCAAAACTTGGTgagttcattaaaaattaccCTCAAGTTTTACATGCAAGTGTTATTGTTGAGCTTGCTCCAGTTGTTAAGTTCCTTAGAGGGCTTGATGTCGAGAAGCAGGATATTGGGTATGTGTTGCAAAAGTATCCTGAACTTCTTGGGTTCAAACCTGAGGGTACAATGAGTACTTCAGTGGCTTACCTTGTTAGTATTGGTGTCAATCCTAGAGATATTGGTCCGATGGTAACCCAGTATCCTTATCTATTGGGAATGAGAGTTGGGACTGTTATCAAACCACTAATTGACTACATGGTATCTTTGGGGctgccaaagaaaattttagctAGGATGTTGGAGAAGCGAGCGTATATACTTGGGTATGACCTTGAAGAGACTGTTAAACCAAATGTGGATTGTTTGATTAGTTTTGGCATAAGGAGGGAGTTGCTGCCTTCAGTTATTGCTCAATATCCGCAGATTATTGGACTGCCTCTTAAAGCTAAATTGTCTTCTCAGCAGTACTTCTTTAGTTTGAAGCTCAAGATTGATCCTGAAGGGTTTGCACGAGTGGTAGAGAAGATGCCACAGGTAGTTAGCCTTCACCAGCATATGATAATGAAACCAGCTGACTTCCTTCTAGGAAGGGGAATACCATCACATGACGTGGCTAGTATGATCATCAGATGTCCACAGTTGGTAGCATGTAGAGTCGAGCTCATGAAGAACAGTTATTACTTCTTCAAGAGTGAGATGGGGAGACCCATAAAAGAGCTTGTGGAGTTCCCAGAATACTTTACTTATAGCTTGGAATCCAGGATCAAACCCAGATACCAGAGGCTGCAAAACAAGGGGATAATATGTTCATTAAATTGGATGTTAAATTGTAGTGACCAGAGATTTGAAGAGAGATTGCAGGGTAATTACATTGAAACTGAGAGTACAGGTCCATCGTTCTGTATGGGTGGGAAGTTAGAGCTACCAGGGGATGAGATAGTGTCAGAAGGGGAAGAGGAGAGCGATGATGAAGTACTATACAGACGAATTGTTTCACTTTA 1541 0.3978 MTSMLRTRKITNFSSSLRSSQLISHELNANPQPIQFPSYPFSAALKNLNPFRVLLFYASFSTQASKFPEYEMPSVTWGVIQGRKEKLVSRVIIFDYLKGLGIIPDELQDVEVPSAVEVMKERVEFLQRLGLTIDDINEYPLMLGCSVRKNIIPVLGYLEKIGIPRSKLGEFIKNYPQVLHASVIVELAPVVKFLRGLDVEKQDIGYVLQKYPELLGFKPEGTMSTSVAYLVSIGVNPRDIGPMVTQYPYLLGMRVGTVIKPLIDYMVSLGLPKKILARMLEKRAYILGYDLEETVKPNVDCLISFGIRRELLPSVIAQYPQIIGLPLKAKLSSQQYFFSLKLKIDPEGFARVVEKMPQVVSLHQHMIMKPADFLLGRGIPSHDVASMIIRCPQLVACRVELMKNSYYFFKSEMGRPIKELVEFPEYFTYSLESRIKPRYQRLQNKGIICSLNWMLNCSDQRFEERLQGNYIETESTGPSFCMGGKLELPGDEIVSEGEEESDDEVLYRRIVSL 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01096 513 Pfam mTERF 155 463 IPR003690 GO:0003690|GO:0006355
Bva09g01096 513 Gene3D Transcription termination factor 3, mitochondrial 259 473 IPR038538 -
Bva09g01096 513 Gene3D Transcription termination factor 3, mitochondrial 121 258 IPR038538 -
Bva09g01096 513 PANTHER CGI-12 PROTEIN-RELATED 56 496 IPR003690 GO:0003690|GO:0006355
Bva09g01096 513 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Bva09g01096 513 SMART mt_12 385 416 IPR003690 GO:0003690|GO:0006355
Bva09g01096 513 SMART mt_12 350 380 IPR003690 GO:0003690|GO:0006355
Bva09g01096 513 SMART mt_12 313 345 IPR003690 GO:0003690|GO:0006355
Bva09g01096 513 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Bva09g01096 513 SMART mt_12 417 448 IPR003690 GO:0003690|GO:0006355
Bva09g01096 513 SMART mt_12 107 132 IPR003690 GO:0003690|GO:0006355
Bva09g01096 513 SMART mt_12 241 272 IPR003690 GO:0003690|GO:0006355
Bva09g01096 513 SMART mt_12 205 236 IPR003690 GO:0003690|GO:0006355
Bva09g01096 513 SMART mt_12 169 200 IPR003690 GO:0003690|GO:0006355
Bva09g01096 513 PANTHER EXPRESSED PROTEIN 56 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01096 Bva-Chr9 5627071 5629481 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva09g01096 mTERF 2.6e-107 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01096 K15032 - zju:107421534 803.127