Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01087 ATGCCTCTTTCTCCCTCTTCAATGGCTTCCATTCCTCAATTCTATTCAAACTACACGTTCCCTACTGATTTCACAGAGTTTAACACTTCTGGGATAGCTGCAGCCAATGACAATGTTTCAATTATAGAGAATACGATGTGGAATCATGATCACAACTTCATTCCTGTGCTTGACAGTGGTGCACTTGATCATATTGCTTCGTTGGATTGCGATACCGTGTCTTCAGCTTGGTTGCCAACCTTCTCGGAGCATCTGGGGAGCGTGTCAACGGACTTGGCAGTGCCGGCAAATTCAGACTGTAAATTAAGTTTCTTCGGCGGTGGAGCAGTTGCCGGGTTTCAGAATTTTAGCACAGGATATCAACCTCATATTGGGGAGTTTGGAGATGAATGTTGTGGGTTTGTGGAGGATGTCAAGGCACCACCTTATCCTAATTCTGCAAGAGAAAACTGGGGGGTTCAAGGTAATCAAATTGCAGCAGTTGAAGAACCCAATATAAAGGTTGGAAGGTATtcagaagaagagagaaaggaaagaattctgcgttatttgaagaaaagaaatcaaaggaACTTCAACAAAACTATCAagTATGCGTGCCGGAAAACCCTAGCTGATCGGCGAGTCAGAGTGAGGGGCAGGTTTGCAAGAAACAATGAGCTATGTGAGGAGGAAAcaggaatgaaaaagaatgagaatcTTCACAAAGAAGACTTGGATTGTGGTGATTCTATTCATTACCAgTTAAGGAACAATGATGAGGATTGGCTGCAAGAAGCTATGGCAAGTCTTGTGTATTTATCTCATTCTTCACCAGATGATGATATGTA 830 0.3904 MPLSPSSMASIPQFYSNYTFPTDFTEFNTSGIAAANDNVSIIENTMWNHDHNFIPVLDSGALDHIASLDCDTVSSAWLPTFSEHLGSVSTDLAVPANSDCKLSFFGGGAVAGFQNFSTGYQPHIGEFGDECCGFVEDVKAPPYPNSARENWGVQGNQIAAVEEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCEEETGMKKNENLHKEDLDCGDSIHYQLRNNDEDWLQEAMASLVYLSHSSPDDDM 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01087 276 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 8 270 - -
Bva09g01087 276 Pfam CCT motif 176 218 IPR010402 GO:0005515
Bva09g01087 276 ProSiteProfiles CCT domain profile. 176 218 IPR010402 GO:0005515
Bva09g01087 276 PANTHER ACTIVATOR OF SPOMIN::LUC2 8 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01087 Bva-Chr9 5577935 5579729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01087 172 224 C2C2-CO-like Transcription Factor Family AT5G15850 47.170 2.35e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva09g01087 CCT 8.5e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01087 - - gmx:102660475 379.407