Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01086 ATGAAGGAAGCTGGAAGAAAACAAGGTGCAATGTCGCCATGCGCGGCATGCAAGCTTCTCAGAAGGAGATGTGCTCGGGATTGCGTGTTTGCTCCTTATTTCCCAGCTGATGAACCTCAGAAATTTGCCAGTGTGCACAAGGTTTTTGGAGCTAGCAATGTCAACAAAATGCTTCAgGAACTACCAGAGCACCAGCGCAGCGATGCAGTTAGTTCAATGGTATATGAAGCAAATGCTAGGGTTAGGGATCCTGTGTATGGTTGTGTGGGAGCAATATCATCTCTGCAACAAGAAGTTGATGTGCTTCAAACCCAGTTGGCTCTGGCACAAGCAGAAGTTGTGCACATGAAAATGCACCAATTCACATCAACATCGTCATCAGATCATCATAATCAGCAGCAGCCATCGTCGATGCCTGCAGCTTCCAATTCATCATCAAACAGGCTCGTGTCTTCTCAGACCAAGTCTCTTTATGCTATGGACATGGTCGTTGATCAAGCCAACATGGGGCAGTCCTTGTGGTCATGCTA 530 0.4679 MKEAGRKQGAMSPCAACKLLRRRCARDCVFAPYFPADEPQKFASVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQEVDVLQTQLALAQAEVVHMKMHQFTSTSSSDHHNQQQPSSMPAASNSSSNRLVSSQTKSLYAMDMVVDQANMGQSLWSC 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01086 176 Coils Coil 92 112 - -
Bva09g01086 176 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Bva09g01086 176 MobiDBLite consensus disorder prediction 121 149 - -
Bva09g01086 176 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 173 - -
Bva09g01086 176 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Bva09g01086 176 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01086 Bva-Chr9 5567665 5571240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01086 1 176 AS2 family AT1G31320 68.362 5.65e-74 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva09g01086 LOB 3.1e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01086 - - gmx:100803188 271.166