Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01084 ATGGTGAATCAGGAAGATTTCAGCAAGAATATTGATTACTTGgttgttgatgatgatgatgatgttcCACTTCCAGGGTTTCGATTCCATCCCACGGATGAAGAACTTGTGAGCTTCTACCTTCGCCGGAAGCTCGACAAGAAACCCATCAGTATTGAACTCATCAAACAGAttgatatatacaaatatgatCCATGGGATCTTCCAAAAGCCAGTTGCACTGGTGGGGAGAAGGAGTGGTATTTCTTTTGCAGAAGAGGGAGAAAGTATAGGAACAGCATAAGGCCTAACAGAGTCACTGGGTCTGGGTTCTGGAAAGCGACTGGTATAGACAAGCCAGTTTACTCTCTAGGAGGAGAAGGCAGTGACTGCATTGGTCTCAAGAAAACATTAGTATATTACCGCGGCAGCGCTGGCAAAGGCACCAAAACTGATTGGATGATGCACGAGTTTCGTCTTCCTTCCAACAATGACACCACCAGCACCAACCTTGCCAATGCCAAGGATCATAACACATCTCCTGCCCAACTAGAAGCAGAAATCTGGACACTCTGCAGAATTTTCAAGCGAAATGTGACACAAAGAAAGTATGGACAAGACTGGAGACAGATAACTGGTGTTAAGCGTCATGCCAATGTTGATAAGATAACTAGAACGAGCAGTGTTGAGTCCAATACTCAAGAAGCCTACATCAGTTTCAGTTCTCCTTCCCGTTATGTTCACCAACATAATTACAATGAACAAAATCCTGTGATCAACTACACCAACGTTAATGATCAAAGAAACCAGTTTCATGCAGGGCAGTTGATCAGTTCATCTCCTGTGGGACAACCTCAAATGTTGTCTGCGTCTAATACTGCTTCCAGCTTCTTGATGAACTCAGTTAGCGATGACTTCTTCAAGTTTGACCAGAACTGGGATGAGCTTGCATCAGTTGTGAAGTTTGCCTTTTG 953 0.4229 MVNQEDFSKNIDYLVVDDDDDVPLPGFRFHPTDEELVSFYLRRKLDKKPISIELIKQIDIYKYDPWDLPKASCTGGEKEWYFFCRRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSLGGEGSDCIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSNNDTTSTNLANAKDHNTSPAQLEAEIWTLCRIFKRNVTQRKYGQDWRQITGVKRHANVDKITRTSSVESNTQEAYISFSSPSRYVHQHNYNEQNPVINYTNVNDQRNQFHAGQLISSSPVGQPQMLSASNTASSFLMNSVSDDFFKFDQNWDELASVVKFAF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01084 317 Gene3D NAC domain 32 194 IPR036093 GO:0003677|GO:0006355
Bva09g01084 317 Pfam No apical meristem (NAM) protein 25 153 IPR003441 GO:0003677|GO:0006355
Bva09g01084 317 PANTHER TRANSCRIPTION FACTOR JUNGBRUNNEN 1-LIKE 16 316 - -
Bva09g01084 317 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 316 - -
Bva09g01084 317 SUPERFAMILY NAC domain 23 190 IPR036093 GO:0003677|GO:0006355
Bva09g01084 317 ProSiteProfiles NAC domain profile. 23 190 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01084 Bva-Chr9 5549456 5551480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01084 14 201 NAC Transcription Factor Family AT5G39820 58.738 1.02e-78 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva09g01084 NAM 2.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01084 - - gmx:100790471 412.149