Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01080 ATGACCAGAAGGACAAGCTTTGGCCTATTTTTGGAGAAGCTTGGAGTGACCATGAAGTCAGAGGAGAAGGAATTGTCTGGGAAAGCCTTGATGAAGCGTGTTATGCAGTGCCGGCTCCCAGCAAGCAGTGCCCTTCTTGAGATGATGATTTTTCATCTTCCATCTCCAGCCAAGGGTCAAAAATACCGCGTAGAGAACTTGTATGAGAGTCCCCTTGATGATGTTTATGCTAATGCTATCAGAAATTGTGATCCCAATGGACCTCTAATGCTCTCTGTCTCAAAGATGATTCCTGCATCAGATAAGGGTAGATTTGATGCCTTTGGTCTTGTCTTCTCTGGTAATGTGGCAACCAGTATGAAGGTCAGAATCATGGGTCCAAATTATGTCCCTGGAGATAAGACTTTTGCAATGGTTGGTTTGGATCAATGCATTACCAAGAATGCTACTTTAACAAACGAGAAGGAAGTTGATGCACACACAATTAGAGCTATGAAGTTTTCTGTGCCACCAGTGGTAAGTGTTGCTGTTGAACCCAAGGTTGCATCTGATCTTTCTAAGCTTGTTGAAGGCCTCAAAGGTTTGGCAAAGTCAGACCCTATGGTTGTCTGTGCTATGAAAGAGACTGGAGAATATGTCATATCTGCTGCTGGTGAACTGCATTTAGAAATCTGTTTAAAGGACTTGCAGGATGATTTCATGAATGGAGCCGAGATCAAAACAAGTCCTCCCATTGTCTCCTTCTGTGAAACTGTTCTTGAGAAGTCAAGCCATGTCATGATGAGCAAGTCACCAAACAAGCACAACCGTCTGCACTTGGAAGCAAGGGCATTGGAGGAGGGACTTGCAGAGGCTATAGATGATGGTCGTGTTCGAGCTCAGGACGATCTGAAAGCCCGGTCCAGAATCTTGTCCGAAGAGTTTGGTTGGGACAAAGATGCTGCCAAGAAAATCTGGTGTTTTGGACCAGACAACACCACTGGACCCAACATGGTGGTGGACATGTGTAGGGGTGCAGTACCTTA 1025 0.4517 MTRRTSFGLFLEKLGVTMKSEEKELSGKALMKRVMQCRLPASSALLEMMIFHLPSPAKGQKYRVENLYESPLDDVYANAIRNCDPNGPLMLSVSKMIPASDKGRFDAFGLVFSGNVATSMKVRIMGPNYVPGDKTFAMVGLDQCITKNATLTNEKEVDAHTIRAMKFSVPPVVSVAVEPKVASDLSKLVEGLKGLAKSDPMVVCAMKETGEYVISAAGELHLEICLKDLQDDFMNGAEIKTSPPIVSFCETVLEKSSHVMMSKSPNKHNRLHLEARALEEGLAEAIDDGRVRAQDDLKARSRILSEEFGWDKDAAKKIWCFGPDNTTGPNMVVDMCRGAVP 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01080 341 CDD EF2_snRNP_III 178 243 - -
Bva09g01080 341 Gene3D Elongation Factor G (Translational Gtpase), domain 3 170 247 - -
Bva09g01080 341 SUPERFAMILY Ribosomal protein S5 domain 2-like 246 338 IPR020568 -
Bva09g01080 341 PANTHER TRANSLATION ELONGATION FACTOR EF-2 SUBUNIT 10 134 - -
Bva09g01080 341 PANTHER TRANSLATION ELONGATION FACTOR EF-2 SUBUNIT 134 338 - -
Bva09g01080 341 CDD aeEF2_snRNP_like_IV 243 338 - -
Bva09g01080 341 Pfam Elongation factor G, domain IV 294 338 IPR005517 GO:0005525
Bva09g01080 341 Gene3D Translation factors 56 137 - -
Bva09g01080 341 SUPERFAMILY EF-G C-terminal domain-like 168 244 IPR035647 -
Bva09g01080 341 Pfam Elongation Factor G, domain III 170 234 IPR041095 -
Bva09g01080 341 Gene3D - 253 340 IPR014721 -
Bva09g01080 341 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 10 134 - -
Bva09g01080 341 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 134 338 - -
Bva09g01080 341 SUPERFAMILY Translation proteins 55 159 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01080 Bva-Chr9 5526221 5528098 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01080 11 338 Eukaryotic Initiation Factors Gene Family AT1G56070 71.989 8.77e-179 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01080 K03234 - osa:4326544 476.478