Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01061 atgagcaACATAAGCATGATAGAAGCGAAGTTACCAGCAGGGTTCAGGTTTCATCCCAGAGATGAAGAACTTGTTTGTGATTACTTGATGACCAAGGTCACACACCGTGACTCCCCTCTTATGATCGACGTTGACCTAAACAAGTGCGAACCTTGGGACATTCCTGAAACGGCGTGTGTTGGAGGGAAGGAGTGGTACTTCTACACACGGCGAGACCggaaatacgcgacggggctACGCACAAATCGCGCCACCGCCTCCGGCTACTGGAAGGCCACCGGGAAGGACAGGCCAATCCTCCGGAAAGGGACATTGGTTGGCATGAGGAAGACATTGGTGTTCTACCAAGGGAAGGCACCCAAGGGGAAAAAGACTGGTTGGGTCATGTATGAGTTTCGCATGGAAGGCCCCCATGGCCCtcctaaaatttcttcaaccaaGGAAGACTGGGTTCTGTGTAGGGTTTTCTTCAAAAGCAGAGATGTTGCTGCCAAACCAAGCATGGGAAGCTGCTATGATGACACTGGATCTTCGTCTCTTCCTGCACTAATGGATTCTTACATAAGTTTTGAGCAAGCTCAAACAcatttggatgattttgagCAAGTGCCCTGcttctcctttctctctcaaaaTCAAACCAACCCCATTAATTTCAACCACATAAACAGTACAATAATGGAGCCAAACTTACCTACCAAGAACAATGCAACCACTTATGGAGGAACACCCAATTTAGGCTCTTGCTTAGACCCTAATTTTTCCTGTGACAGAAAGGTATTAAAAGCTGTTTTGAATCAGCTCACAAAGATGGAAAGAAATCCACATAACCCAATTAGTGTAAAAGGGTCACCAAGCTTATCTGAAGTGGGTATGCCTAATATGTGGAACAATTGTTG 899 0.4227 MSNISMIEAKLPAGFRFHPRDEELVCDYLMTKVTHRDSPLMIDVDLNKCEPWDIPETACVGGKEWYFYTRRDRKYATGLRTNRATASGYWKATGKDRPILRKGTLVGMRKTLVFYQGKAPKGKKTGWVMYEFRMEGPHGPPKISSTKEDWVLCRVFFKSRDVAAKPSMGSCYDDTGSSSLPALMDSYISFEQAQTHLDDFEQVPCFSFLSQNQTNPINFNHINSTIMEPNLPTKNNATTYGGTPNLGSCLDPNFSCDRKVLKAVLNQLTKMERNPHNPISVKGSPSLSEVGMPNMWNNC 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01061 299 Pfam No apical meristem (NAM) protein 12 134 IPR003441 GO:0003677|GO:0006355
Bva09g01061 299 PANTHER OS08G0200600 PROTEIN 1 255 - -
Bva09g01061 299 SUPERFAMILY NAC domain 2 158 IPR036093 GO:0003677|GO:0006355
Bva09g01061 299 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 255 - -
Bva09g01061 299 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Bva09g01061 299 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01061 Bva-Chr9 5430583 5433362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01061 2 299 NAC Transcription Factor Family AT1G56010 57.862 2.05e-116 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva09g01061 NAM 5.1e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01061 - - gmx:100170720 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01061 09 5430583 5433362 Bva09g01061 09 5430583 5433362 ECH