Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01059 ATGGCATCTACAGTCATGGCTTCTGCTTCTGTGAGCCTAAAACCAGCTTCTTTCACTGTTGAGAAATCTGCAGCGAGAGGGCTTCCCTCACTGTCAAGGTCTTCTGCTTCCTTCAAAGTTGTGGCCAGTGGCAAGAAGGTCAAAACCGACAAGCCTTATGGAATTAATGGTGGCATGAGCTTGAGGGATGGGCTAGATGCATCTGGAAGGAAAGGCAAGGGAAAGGGTGTTTACCAATTTGTCGACAAATACGGTGCTAATGTGGATGGCTACAgTCCTATTTTCGACACTAATGATTGGTCTCCAAGTGGGGATGTCTATGTTGGAGGTACCACTGGCTTGGCTATCTGGGCTGTTACCCTTCTTGGCCTTCTTGCTGGGGGTGCACTTCTTGTCTTCAACACAAGTGCTTTGGCACAATA 422 0.4787 MASTVMASASVSLKPASFTVEKSAARGLPSLSRSSASFKVVASGKKVKTDKPYGINGGMSLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIFDTNDWSPSGDVYVGGTTGLAIWAVTLLGLLAGGALLVFNTSALAQ 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01059 140 PANTHER PHOTOSYSTEM II 10 KDA POLYPEPTIDE, CHLOROPLASTIC 1 140 IPR006814 GO:0009523|GO:0009654|GO:0015979|GO:0042651
Bva09g01059 140 Pfam Photosystem II 10 kDa polypeptide PsbR 44 139 IPR006814 GO:0009523|GO:0009654|GO:0015979|GO:0042651
Bva09g01059 140 PANTHER BNAANNG27100D PROTEIN 1 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01059 Bva-Chr9 5422575 5424428 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01059 K03541 - mnt:112090576 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01059 09 5422575 5424428 Bva09g01059 09 5422575 5424428 ECH