LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva09g01012	ATGAGGCTCCCTGGTTCACCCGGCGTATTGCAAGACATAGTGAAAGGTGCATTGGAGCAAGCAGGGTTAGTAGTAAATTTCTTCTGCTGTCTCCATGTGACCAGCAACTACCTTTTATCTACGGTGCATGTGCAGGGTATAAGCATGCTCCCTACTTTAAATATGGAAGGCAATTTGCTTCTTGTGGAGCATGTGTCTCCACGGATGGGCAAGCTTAGGATAGGAGATATGGTGTCGGTTCAATCGCCGCTGAACCCTAGACGAGTTTTGATAAAGCGCATTTTGGGCATGGGAGGGAACACCGTCACCTACACGGATCCTGCCCGGGGTGATGCAACTCATACAGCAGTGGTGCCGAAGGGACATGTTTGGATTCAAGGGGATAACATCTACGGGTCCACTGATTCGCGGCAGTTTGGTCCTCTTCCTTATGGCCTTTTACAAGGAAAAGTGCTTTGCAGGgCTTGGCCAATTGGTGACTTTGGATCGCGGGGTCATTG	500	0.498	MRLPGSPGVLQDIVKGALEQAGLVVNFFCCLHVTSNYLLSTVHVQGISMLPTLNMEGNLLLVEHVSPRMGKLRIGDMVSVQSPLNPRRVLIKRILGMGGNTVTYTDPARGDATHTAVVPKGHVWIQGDNIYGSTDSRQFGPLPYGLLQGKVLCRAWPIGDFGSRGH	166

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva09g01012	166	SUPERFAMILY	LexA/Signal peptidase	37	163	IPR036286	-
	Bva09g01012	166	Gene3D	Umud Fragment, subunit A	35	163	-	-
	Bva09g01012	166	CDD	S26_SPase_I	40	151	IPR019533	GO:0004252\|GO:0006465
	Bva09g01012	166	PANTHER	PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN	10	163	-	-
	Bva09g01012	166	PANTHER	PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED	10	163	-	-
	Bva09g01012	166	Pfam	Signal peptidase, peptidase S26	22	106	IPR019533	GO:0004252\|GO:0006465
	Bva09g01012	166	Pfam	Signal peptidase, peptidase S26	114	156	IPR019533	GO:0004252\|GO:0006465
	Bva09g01012	166	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	90	102	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Bva09g01012	166	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	37	53	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Bva09g01012	166	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	118	137	IPR000223	GO:0006508\|GO:0008236\|GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva09g01012	Bva-Chr9	5159821	5162358	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva09g01012	49	165	MADS-box Gene Family	AT1G29960	49.153	7.82e-37	122

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva09g01012	K09647		-	csin:114274489	191.43