Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01008 ATGATCAACTTGCTGCATCAAATGAGAAAAGCTCTAGTTGTAGGCCTTTACATCACCGTAGGCTGCCTCGCTTTCATCGCATCCAAGATTATCATCTCAATTCTCCTCTataaaagatggaaaagaaagCACATGGTTTATGAACAAGGCCATGGAGGTGGGAAGATGGTAATATTTAGGTCTTCAGTGCTTAAATCCCTCAAATCTGATGTGGTCTTAAATATGATACTGAAACTGAGCAACAAGGACATCATTGGCTCTGGTGGTTATGGGACAGTTTATAAGCTGAAAATAGATGACTCTATCGCCTTCGCCGTGAAGAGACTAAGCAGAGGAACTGCAGATAGAGACAAAGGGTTTGAAAGAGAGATGGAAGCAATGACAGACATCAACCACCGCAACATTGTGACTCTTCATGGATACTACACTGCCCCAGACTATAACCTCCTCATATATGAGCTAATGCCTAATGGAAGTTTGGATACTCGCCTGCATGGAAGATCAATAGACAAGCAGATTTTGGATTGGCAATGCAGATATAGAATAGCCATTGACGCTGCTCGAGGAATATCATATCTTCACCATGATTGCATCCCTCATATCATCCATAGGGATATCAAGTCAAGTAATATATTACTAGATCAGAACATGGAAGCTCGAATTTCTGATTTTGGATTAGCCATATTTATGGCACCAAGTAAAACTCATGTTTCAACAATTGTGGTTGGAACTTTTGGATACTTAGCCCCTGAATATTTTGATACAGGAAGAGCAACAGTAAAGGGGGATGTTTACAGTTTTGGAGTTGTGCTTCTAGAGCTTTTGACAGGGAAAAAACCCAGTGATGGAACATTTGTAGAAGAGGGAACTACGCTTGTAACATGGGTTAAGGCTGTTgttcaagagaaaaaagaggagaTAGTTCTAGACGAAAGCTTAGGTTCTTGTCCAATGGAAGAGGTTAACAATGTCTTCAACATTGCAATGATGTGTCTTGAACCAGAGCCCTTGAAGAGGCCAACCATGGATGAGGTTGTCAAGTTGCTAGAGCAAAGAAAATCAGACAAGATTGTTACGGCTGATTG 1085 0.3963 MINLLHQMRKALVVGLYITVGCLAFIASKIIISILLYKRWKRKHMVYEQGHGGGKMVIFRSSVLKSLKSDVVLNMILKLSNKDIIGSGGYGTVYKLKIDDSIAFAVKRLSRGTADRDKGFEREMEAMTDINHRNIVTLHGYYTAPDYNLLIYELMPNGSLDTRLHGRSIDKQILDWQCRYRIAIDAARGISYLHHDCIPHIIHRDIKSSNILLDQNMEARISDFGLAIFMAPSKTHVSTIVVGTFGYLAPEYFDTGRATVKGDVYSFGVVLLELLTGKKPSDGTFVEEGTTLVTWVKAVVQEKKEEIVLDESLGSCPMEEVNNVFNIAMMCLEPEPLKRPTMDEVVKLLEQRKSDKIVTAD 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01008 361 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 8 354 - -
Bva09g01008 361 ProSitePatterns Protein kinases ATP-binding region signature. 85 107 IPR017441 GO:0005524
Bva09g01008 361 SMART serkin_6 79 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01008 361 ProSiteProfiles Protein kinase domain profile. 79 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01008 361 Pfam Protein kinase domain 81 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01008 361 PANTHER BNAA07G39120D PROTEIN 8 354 - -
Bva09g01008 361 SUPERFAMILY Protein kinase-like (PK-like) 73 351 IPR011009 -
Bva09g01008 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Bva09g01008 361 Gene3D Transferase(Phosphotransferase) domain 1 155 360 - -
Bva09g01008 361 Gene3D Phosphorylase Kinase; domain 1 56 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01008 Bva-Chr9 5145940 5148850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01008 10 352 Receptor kinase-like Gene Family AT2G35620 45.376 5.02e-99 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Bva09g01008 Pkinase 2.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01008 - - fve:101296186 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01008 09 5145940 5148850 Bva09g01008 09 5145940 5148850 ECH