Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01005 ATGGATAGTGATGCAATGGGGCGCGAAGAGTACTCGCTGCTGAAGGATTTAAGGCTGGAAATTGAGACACAAGAGGGCACTTTTTCTCTCTGCTTCTGGGTTTATATGATGAGTTCCACTCCATTTCCTGCTACGATTATCCAACAGGTGCACAATGATATGTCAGAAAGTGctccttttcttctaattaatgACAGGAAAAGATTGAATCTTTTACCAGTTCTTCTCATACATGAAGAAGCTCCTGATACTGGCAATGTCAATTCCTGGAAAGAAGTCCCGCATGCAACCGTAGATTTTGAGTTTCCTTTGGAAAAATGGGTTCATGTTGGATGTGAGGTATCTCCTGATCATATCCAACTTCAGATTAATGGAGAGGTTAAAGGAGAAAGGTCTCTGTCTTCTTTATTAGACAAGGAATCTGATTCAAGCATGTTGAAGAAGATATCTTTGGCTAATGTAGGTGGGGATGGCAACGGTGTTCAGGGTTATGTGCACAATTTGGAAGTTTTCCCCGTTGTTTCATCTATCAAGGATCATCATTTAAAGGACCCTCCGATGAAGTTATCCATTGATGAATCATCTGCCTCtgagattgaagaagaaagtgaTGGCGTTTGGGGCATTGTTGGTGGCAAGGCATCTTGTCGCAGGAACTTCTCTTTAGACGTTGCTCTATCAGATGTCTTTGGCCAGCCTGTAGACAAAGAGAGTGAGgTTTTTGCTTCACTTTTGTATGCTGACACTGGAGCACCTGTGGAGGATACAACTGATGAAGAAGCTCCACTTTTGGTTAGCTATGACGGGATTGAATTTGCTGCTTCTGAAAGGCCAAGCAAACTTGTGCGGGGACGTGCATCATTTAAGCTCAAGATATCACAGCTTTCATCCAAGTGCGATAATAGGCTGTTCCTCATCAGCTTTAATATGCCAAAGTTAGGaacttattcttttcttcaaacATTCTCCCGACCAATTCGGTGTATCTCAAGGAGCCGTAACAATGCACGGTTGTCCACTCTGGTATGGAGAAAATCAACTTCTTCTCTTCAACGACTCAGTTTATCCCAACCATCGCCAACAGGTGATGGCCCATTGGAACATCAGCATTCTGTTCATGAGGCAAAAGCCAGTCCATTGTTAAAGCGGTTTAGATTTGGGCATGACAAAATATCTGTATCAGTGAAGGCTGACCCTATGTCTGAGCTACCTGATGAGGAGTGTAATTCTCATGCTGGGACCGGTAATCAGGTTGAGAAGGAGTTTGCAACGAACTTGGAAGGTAGGCCTGACAACTTTGATGAAGTCGATGACTCCCCATCTGATACGGAGAGCATAGGGGAGAGAAATTCACCTTCTAAGAGTATTGCAAGTAGAAGAACTCCGATCTCTGATATGACCATTTTCAAATACTGTTTGGCAAGCTTAGCTGAGAGGTCTCTCATGCTCAAGGAAATTTCTACCTCTACTTCTGATAAAGAAATTTCGGAATTGGCTCAGCAGGTGTCACACTATTCAGGATGTTCACATCACGGAAAGCAAATATTAATGGCCAAGAGATTGATAGAAGAAGGAACAAAAGTTTGGAAGATGATGTCTCAAAACAATCCTCATATTCATTGGGAAAGTGCAGTTTACGAGATCGAAGAGCAATTCATGAAGGTTTCTTGTGGTTCAAGATCTCTCACACACCAGgATCTGGAGCTTCTGAGAAGAATTGCTGGATGTCGAGATTATCTGGCCCAAGAGAACTTTGAGAAGATGTGGTGCTGGTTATACCCAGTGGCTTTCACAATTTCAAGGTACTGGATAAATGCAATCTGGAATTCTATGTCACCTAAGTGGATAGAAGGATTCATAACTAAGGAAGAGGCAGAAGCTTCACTTCAAGGTCCAAGGGGACTTCAAGAACCCGGGACATTTATACTCCGATTTCCCACCTCAAGAAGTTGGCCCCATCCAGATGCTGGTAGCCTTATTGTGACATATGTTGGCAGTGACTACAACCTTCACCATAGGCTACTTTCCCTTGATCATGTTTATGGCTCAGGAGAAAAAGGAACTGAGGCAAAGCCACTGCAAGATTTGCTACTGGCAGAACCAGAGCTTTCGCGATTAGGAAGGATAGTAAGAAGTCACTA 2141 0.4213 MDSDAMGREEYSLLKDLRLEIETQEGTFSLCFWVYMMSSTPFPATIIQQVHNDMSESAPFLLINDRKRLNLLPVLLIHEEAPDTGNVNSWKEVPHATVDFEFPLEKWVHVGCEVSPDHIQLQINGEVKGERSLSSLLDKESDSSMLKKISLANVGGDGNGVQGYVHNLEVFPVVSSIKDHHLKDPPMKLSIDESSASEIEEESDGVWGIVGGKASCRRNFSLDVALSDVFGQPVDKESEVFASLLYADTGAPVEDTTDEEAPLLVSYDGIEFAASERPSKLVRGRASFKLKISQLSSKCDNRLFLISFNMPKLGTYSFLQTFSRPIRCISRSRNNARLSTLVWRKSTSSLQRLSLSQPSPTGDGPLEHQHSVHEAKASPLLKRFRFGHDKISVSVKADPMSELPDEECNSHAGTGNQVEKEFATNLEGRPDNFDEVDDSPSDTESIGERNSPSKSIASRRTPISDMTIFKYCLASLAERSLMLKEISTSTSDKEISELAQQVSHYSGCSHHGKQILMAKRLIEEGTKVWKMMSQNNPHIHWESAVYEIEEQFMKVSCGSRSLTHQDLELLRRIAGCRDYLAQENFEKMWCWLYPVAFTISRYWINAIWNSMSPKWIEGFITKEEAEASLQGPRGLQEPGTFILRFPTSRSWPHPDAGSLIVTYVGSDYNLHHRLLSLDHVYGSGEKGTEAKPLQDLLLAEPELSRLGRIVRSH 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01005 713 MobiDBLite consensus disorder prediction 426 459 - -
Bva09g01005 713 SUPERFAMILY SH2 domain 608 694 IPR036860 -
Bva09g01005 713 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 174 IPR013320 -
Bva09g01005 713 MobiDBLite consensus disorder prediction 445 459 - -
Bva09g01005 713 CDD SH2_SHA 604 713 - -
Bva09g01005 713 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 8 710 IPR001217 GO:0003700|GO:0006355|GO:0007165
Bva09g01005 713 PANTHER SIGNAL TRANSDUCER AND TRANSCRIPTION ACTIVATOR 8 710 - -
Bva09g01005 713 Pfam Concanavalin A-like lectin/glucanases superfamily 24 172 - -
Bva09g01005 713 ProSiteProfiles Src homology 2 (SH2) domain profile. 615 713 IPR000980 -
Bva09g01005 713 MobiDBLite consensus disorder prediction 352 373 - -
Bva09g01005 713 Gene3D SH2 domain 602 709 IPR036860 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01005 Bva-Chr9 5129721 5136196 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Bva09g01005 Laminin_G_3 6.5e-07 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01005 - - gmx:100803169 1089.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01005 09 5129721 5136196 Bva09g01005 09 5129721 5136196 ECH