Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00986 ATGGAACGTCTGGTTAATTTGCATCGCTATCTACTTAACGAGGAGCCAATTATCTCACCGGTGACAAACAAGACGCGCGAATCTTTCACGAGTAATGCAAATTTTGACACCAATGTGGTGATGGTTTTGGCTTCTCTGTTATGTGCACTAATATTTGCTCTTGGGGTGAACTCAATTGTGTGCTGTGCTAGGCGTTGTGGCCGTAGATTTCCCACGGAGACCCGACGACAAACAGCTTCAAGGCTTTCTACTACACGCCTTAAAAAACGTGATTCAAGTCAGATTCCGGTGGTAGTGTACGGCTTCGGCGTGGATATTCCGGCGACGGACTGCTCCATTTGTCTTGGGGAGTTCGAGAAGGGAGACAAGGTCCGAATTCTGCCACAATGCAATCATGGGTTCCATGTGAGGTGCATAGATGCATGGCTTGTCTCACATTCTTCTTGTCCAAATTGCCGCCGTTCACTGTTTGAGCAGTCAAGTTCAACAAATTCAAATCCAAACCACGAAGTTGCCGGAGATCGACAACCTGAAGATGGGTCCGGCCGGCAAGATAACTTTGTTGTGGTCGTTGACCGGGCTAGCTG 587 0.4821 MERLVNLHRYLLNEEPIISPVTNKTRESFTSNANFDTNVVMVLASLLCALIFALGVNSIVCCARRCGRRFPTETRRQTASRLSTTRLKKRDSSQIPVVVYGFGVDIPATDCSICLGEFEKGDKVRILPQCNHGFHVRCIDAWLVSHSSCPNCRRSLFEQSSSTNSNPNHEVAGDRQPEDGSGRQDNFVVVVDRAS 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00986 195 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 163 IPR013083 -
Bva09g00986 195 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 8 191 - -
Bva09g00986 195 CDD RING-H2_PA-TM-RING 110 153 - -
Bva09g00986 195 Pfam Ring finger domain 110 153 IPR001841 -
Bva09g00986 195 MobiDBLite consensus disorder prediction 159 187 - -
Bva09g00986 195 SUPERFAMILY RING/U-box 105 160 - -
Bva09g00986 195 PANTHER RING-H2 FINGER PROTEIN ATL74 8 191 - -
Bva09g00986 195 SMART ring_2 111 152 IPR001841 -
Bva09g00986 195 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00986 Bva-Chr9 5077392 5077979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00986 7 162 C3H Transcription Factor Family AT3G10910 48.485 9.04e-47 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00986 K19040 - tcc:18602224 230.72