Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00979 ATGCCTGGGAATAAGTATAACggtaataatgataattttccAGGTCGTGTTGAACGACttttaagagaaagagagctAAGAAAAAGCAGCAGGGCTTCTCATTTGAATGAGTCAactgataataataattgggTTACTGAACCTTTTGAGCATGACCAGCGcttaagagaagaaaataactcAGTTGCTTCCTATGTTGAACAATTCCTCGAAGGGGCTGCAGCTGCAAGGGCGTTTGGTGAGGCATGTGAAAGGCTAGAAGGGAGGCCTTTAAGACAGCGACTTTTGGTGGTGGCGAACAGGCTGCCAGTCTCAGCAGTTAGGAAAGGTATAGACTCTTGGTCCCTGGATATAAGTGCTGGTGGGCTAGTGAGCGCTCTTTTAGGTGTCAAGGAGTTTGAGGCAAGGTGGATAGGGTGGGCAGGTGTCAATGTGCCAGATGAGATTGGACAAAAGGCACTTACTAAAGCTTTGGCTGAAAAGAGGTGTATCCCAGTATTTCTTGATGAAGAAATTGTTCATCAATATTATAATGGCTACTGTAACAACATCTTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGATCGCCTGGCCACCACGCGGAGTTTCCAGTCTCAGTTTGCAGCATATAAGAAAGCAAATCAAATGTTTGCCGATGTTGTGAACAAACACTATGAAGAGGGTGACGTTGTTTGGTGCCATGATTACCATCTTATGTTTCTTCCTAAATGCTTAAAGGAGCATAACAGCAAAATGAAAGTTGGCTGGTTCCTCCACACCCCATTTCCATCTTCTGAAATTCATAGGACACTGCCATCTCGTTCAGAGCTCCTGCATTCTGTTCTTGCAGCTGATTTAGTTGGTTTTCACACCTATGATTATGCAAGGCACTTTGTTAGTGCTTGTACTCGCATCCTTGGACTCGAGGGTACGCCTGAAGGGGTTGAGGATCAAGGGAGAGTGACTCGAGTCGCTGCCTTTCCAATTGGGATAGATTCAGAACGGTTCATTCGCGCACTGGAGCTTCCTCAAGTCCAGGATCAcgttaaagaattaaaagaaagatttaaAGGCAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATTCCTCAGAAAATTCTTGCATTCGAAAAATTTCTGGAAGAGAATCCTTATTGGCGTGATAAAGTAGTTTTGCTTCAAATTGCTGTGCCAACAAGAACTGATGTTCCTGAGTATCAGAAGCTAACAAGCCAGGTTCATGAGATTGTTGGTCGTATTAATGGCAGATTTGGAACACTGACTGCGGTTCCCATACATCACCTGGATCGTTCTCTCGACTTTCTTGCACTATGTGCTTTATATGCTGTTACTGATGTAGCACTTGTCACATCCTTGAGAGATGGAATGAATCTTGTCAGCTATGAATTTGTGGCCTGCCAGGATCAAAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGTGCTGCACAATCTCTAGGTGCTGGAGCAATTCTAGTTAACCCCTGGAACATCACTGAAGTTGCTGCTGCAATTGCCCAGGCTCTGAATATGTCAtctgaagaaagagagaaacgACATAAGCATAATTCTTCACATGTAAAAACCCATACTGCTCAGGAATGGGCAGAAACTTTTGTGAGTGAACTAAATGATACTGTAGTTGAGGCACAAATAAGGACTAGACAGGTTCCACCTCCGCTTCCAATCAAGACTGCAATCGAACGTTATCAACAGTCGACTAATCGATTGCTCATTTTGGGATTCAATGCAACTTTAACTGAACCAGTTGACAAGAAAGGTGACCAGATTAAAGAAATGGAACTCAAAGTGCATCCAGAATTGAAACAACCCGTGAGAGAACTTTGCGGTGATCCAAAGACCACAGTTGTTGTGCTTAGTGGAAGTGATAGAAATGTCCTAGATGAGAACTTCAAGGAGTATGACATGTGGTTGGCAGCAGAGAATGGGATGTTCTTAAGCCATACAAGGGGAGAATGGATGTCAACAATGCCAGAGCATCTGAATATGGAATGGGTTGACTGTGTAAAGCATGTTTTTGAGTACTTCACGGAAAGAACACCCCGGTCACATTTTGAACTCCGGGAAACTTCACTTGTATGGAATTACAAATATGcagATGTTGAATTTGGAAGACTCCAGGCAAAGGACATGTTGCAGCATCTCTGGACAGGTCCAATTTCTAATGCATCAATCGATGTTGTTCAAGGTAGCCGATCTGTCGAAGTGCGAGCTGTCGGCGTTGCAAAGGGAGCAGCTATTGACCGCATCCTGGGTGAGATAGTTCATAGTAAATCCATGACAACACCAATTGATTATGTCCTTTGTATAGGACATTTTCTTGGAAAGGATGAAGATGTTTATACCTTTTTCGAGCCGGAGCTTCCTTCTGATGGTCTCGGTCTCCCAAGAACCAAGGTAACAACCGAAGGGGTTAAGTTTCCTGGTGAGAGAAAATCATCTTTGAGGATTCCAGCCAGTAAAAATGGACACAAGTCATCTCCGAACAAGACGCAGAGGCCTCTGCCAAATTCTGAGAAGAAAACCAACAATCACGTCTGCGGCGCAGCACGACGGCCGGCGCCGGAGAAGATCTCGTGGAATGTCCTTGACCTGAAGAAGGAGAATTACTTCTCTTGCGCTGTTGGGCGAACTCGAACGAGTGCCCGATATACGCTTGGATCATCAGATGATGTAGTTGCATTTCTGAATGAACTTGCAGACGCAACTACTCCAAATTTCTG 2789 0.4249 MPGNKYNGNNDNFPGRVERLLRERELRKSSRASHLNESTDNNNWVTEPFEHDQRLREENNSVASYVEQFLEGAAAARAFGEACERLEGRPLRQRLLVVANRLPVSAVRKGIDSWSLDISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKEHNSKMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRVTRVAAFPIGIDSERFIRALELPQVQDHVKELKERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFLALCALYAVTDVALVTSLRDGMNLVSYEFVACQDQKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIAQALNMSSEEREKRHKHNSSHVKTHTAQEWAETFVSELNDTVVEAQIRTRQVPPPLPIKTAIERYQQSTNRLLILGFNATLTEPVDKKGDQIKEMELKVHPELKQPVRELCGDPKTTVVVLSGSDRNVLDENFKEYDMWLAAENGMFLSHTRGEWMSTMPEHLNMEWVDCVKHVFEYFTERTPRSHFELRETSLVWNYKYADVEFGRLQAKDMLQHLWTGPISNASIDVVQGSRSVEVRAVGVAKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDVYTFFEPELPSDGLGLPRTKVTTEGVKFPGERKSSLRIPASKNGHKSSPNKTQRPLPNSEKKTNNHVCGAARRPAPEKISWNVLDLKKENYFSCAVGRTRTSARYTLGSSDDVVAFLNELADATTPNF 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00979 929 Pfam Glycosyltransferase family 20 94 559 IPR001830 GO:0003824|GO:0005992
Bva09g00979 929 CDD HAD_TPP 592 809 - -
Bva09g00979 929 SUPERFAMILY HAD-like 591 922 IPR036412 -
Bva09g00979 929 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 26 921 IPR001830 GO:0003824|GO:0005992
Bva09g00979 929 Gene3D - 681 761 - -
Bva09g00979 929 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 94 559 IPR012766 GO:0003825|GO:0005992
Bva09g00979 929 Gene3D - 615 775 IPR023214 -
Bva09g00979 929 MobiDBLite consensus disorder prediction 841 866 - -
Bva09g00979 929 MobiDBLite consensus disorder prediction 824 866 - -
Bva09g00979 929 Pfam Trehalose-phosphatase 614 822 IPR003337 GO:0003824|GO:0005992
Bva09g00979 929 Gene3D Glycogen Phosphorylase B; 88 340 - -
Bva09g00979 929 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 26 921 - -
Bva09g00979 929 TIGRFAM T6PP: trehalose-phosphatase 593 803 IPR003337 GO:0003824|GO:0005992
Bva09g00979 929 CDD GT20_TPS 94 559 IPR001830 GO:0003824|GO:0005992
Bva09g00979 929 Gene3D Glycogen Phosphorylase B; 341 544 - -
Bva09g00979 929 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 93 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00979 Bva-Chr9 5032885 5043756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00979 1 926 Trehalose Biosynthesis Gene Families AT1G78580 79.706 0.0 1521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00979 K16055 - egr:104450066 1562.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00979 09 5032885 5043756 Bva07g01578 07 15251467 15264735 ECH
Bva09g00979 09 5032885 5043756 Bva09g00979 09 5032885 5043756 ECH