Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00975 ATGCCACTACACTACCCATTTGCTGCCACTGCAACGTGTGTGAGGCTGCTGAGGCAAAGGTTTTGTGCTGTGCAGACGAGGCAGCGCTATGTTGAATGTGACCAGAAGGTTCACGCAGCTAACAAGCTCGCCAGCAAGCACCAGAGAGTTCCTCTTTCTACCTCTTCTTCTCAGATACCTAAATGTGATATTTGTCAGGAAACAGTAGGGTACTTCTTTTGTCTAGAGGATCGGGCTTTACTCTGCAGGAAATGTGACGTTGCAATACATACAGCAAATGCCTATGTGTCTGCTCATCAGAGGTTTCTGCTCACTGGTGTAAAAGTAGGCCTTGAAGCTACCGAGCCTGGTGCTTCGTCATCTTCTGTGGAGTCGCTTTCTGGGGAGAAAAAGTCAGATGCCAAATCTTCTTCTGTCTCTAAAAGAGTTGCCTCATTGCCCCAGTCATCTGAATACAATGAAGTGCTACCCATCCATGTTGGAGGGGGTAGGGAGTTTTCACCAAATCAGGTGCCCTATGGTGGAGGTTCTAATGCTGGAAACTTCCCTCCCTGGCCCATTGATGAATTTCTTGGGTTGAATGAATTCAAtccaaattataattacatggATAATGGATCATCCAAGGCTGACAGTGGTAAGCTTGGTGGTCCCGATTCTCCTGTCTTGAGATCTAGTGAAGAGGAAATGGTTGACAAGGATGAATGCTTGGGGCAGGTTCCCGATTCATCCTGGAGAGTTCCTCAGATCCCTTCCCCACCTACAGCTTCAGGGTTATATTGGCCAAAAGATCATCGGTATTCATCCGACAGTGCTGTGTTTGTTCCAGACTTAAACTTTTCTTACATGTG 851 0.4606 MPLHYPFAATATCVRLLRQRFCAVQTRQRYVECDQKVHAANKLASKHQRVPLSTSSSQIPKCDICQETVGYFFCLEDRALLCRKCDVAIHTANAYVSAHQRFLLTGVKVGLEATEPGASSSSVESLSGEKKSDAKSSSVSKRVASLPQSSEYNEVLPIHVGGGREFSPNQVPYGGGSNAGNFPPWPIDEFLGLNEFNPNYNYMDNGSSKADSGKLGGPDSPVLRSSEEEMVDKDECLGQVPDSSWRVPQIPSPPTASGLYWPKDHRYSSDSAVFVPDLNFSYM 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00975 283 MobiDBLite consensus disorder prediction 115 145 - -
Bva09g00975 283 Pfam B-box zinc finger 59 99 IPR000315 GO:0008270
Bva09g00975 283 MobiDBLite consensus disorder prediction 204 260 - -
Bva09g00975 283 Gene3D Classic Zinc Finger 10 98 - -
Bva09g00975 283 CDD Bbox1_BBX-like 61 104 - -
Bva09g00975 283 PANTHER B-BOX ZINC FINGER PROTEIN 18 27 281 - -
Bva09g00975 283 SUPERFAMILY B-box zinc-binding domain 50 98 - -
Bva09g00975 283 ProSiteProfiles Zinc finger B-box type profile. 57 104 IPR000315 GO:0008270
Bva09g00975 283 PANTHER B-BOX ZINC FINGER PROTEIN 22 27 281 - -
Bva09g00975 283 SMART bboxneu5 57 104 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00975 Bva-Chr9 5010643 5014103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00975 33 281 C2C2-CO-like Transcription Factor Family AT1G78600 46.181 5.55e-71 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva09g00975 zf-B_box 1.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00975 - - gmx:100790959 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00975 09 5010643 5014103 Bva09g00975 09 5010643 5014103 ECH