Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00967 ATGACCTTCCCTCGAGCTttgcttctctctcttctcgcTCTTTGCTTTGTTGCTTCTTCTTATGGACTTCTTCTCCCAGATGAAGTGCAAGCTTTGAAAGACATAGCCAAGACACTTGGGAAGACGGATTGGGACTTCAACGTAGATCCTTGTAGTGGAGAAAGCAACTGGGTTAAGCCACTTCCATTGAACGGAGAGGAAAATGCTGTCACTTGCGGAAATTGCTCTTTGGTCAACGGCACCAACTTTTGCCATGTTGTTAGCATAGTTCTGAAACAGGAAAATCTTAATGGCACACTCCCATCGGACCTGGGCAGGTTTCCTTACCTCTATGAAATTGATCTCACCCGGAACTACCTTAACGGTACAATCCCTAAAGAATGGGGCTCCATCAAGCTTATCAACATTTCTCTCCTTGGAAACCGACTAACGGGTCCAATCCCGAAAGAACTGGGAAACATCACCACTCTCAAGAGTTTGGTCCTCGAGTATAATCAGTTTTCTGGAAATATTCCTCCGGAGCTGGGGAATCTTATCCAGATTGAAAGACTCTTTCTTACCTCCAACAATTTTACGGGAGACGTACCTGCAACATTTGAAAGGCTCACTGCATTGAAGGATGTTCGAATCGGTGACAATCATTTGTCTGGAACAATACCCAATTTCATCCAGAATTGGACAAGGCTGGAGAAACTAGTGATTCAAGGGAGTGGTTTGAGTGGGCCAATTCCTTCTGGGATTTCATTCTTGACAAATTTAATTGACTTGAGAATCACTGACTTGCAAAATGGAACGGATTCTACTTTTCCACAACTTGCTAATTCGACAAGTTTGCAAACGTTGATATTAAGGAGTTGTAATATTAATGGAACACTGCCAGAATATCTTGGAAATATGAGAAGTTTAATTACTATAGACCTCAGCTTTAACAAATTAAGTGGAACCATTCCGAGCTCCTATTATGGTCTAAGAAAATCACAGTACTTATATTTAACTGGAAACCTTCTTACTGGACCAGTGCCTGATTGGACAGATCAAGCAGGTGCCGTAGATCTTTCATATAATAACTTCAGTGTCAGCAACTCAGGGCAGCAGACATGTCAAACAGGAAGTGTgAACTTGTTTTCGAGCTCATCGATGGACAATGACTTAGGAATTCCTTGTCTGGGAAGTGCTAGCTGTCCTAAATACTGGTACTCGCTCCTTATAAACTGTGGTGGAAAGCAGGTATCCGTGAATGGAAACACATATGATGATGACTCAGATGCAGGTGGACCAGCAAGGTTCTGGGAAAGTGCAACAAACTGGGCAGAAAGCAATACTGGTCACTTCATGGATAATACCCGCTCACCTTACTATACTTGGTCAAATTCATCTGGGCTTTCTATGACCAATGCTGAACTGTACACGGATGCACGTGTTTCTCCCATTTCTCTAACTTATTATGGATTTTGCCTGGGAAATGGTAGCTACACGGTAAATCTCCATTTTGCAGAGATAATGTTCACTGATGATACAACATATGGCAGCCTAGGGAGGCGTGTTTTTGATGTCTACATTCAGGGAAAGCTGGTGCTTAAGGATTTTAATATTGCACGAGAAGCAGGAGGAGTTGATAAGgcaatcataaaaaattttactgcCATTGTGACTAGGAGTACGTTGGAGATTCGCTTCTATTGGGCTGGGAAAGGAACAATTGATCTCCCATTTAGATCTGTATATGGCCCTCTTATATCAGCTATATCTGTTGTTCCTGacTTCACACCCCCGTTAACACCTTCAGAAGATGGAAGTTCCTTAGCTACGGGGGCTGTGGTGGCAATTGTTGCTGCAGGAGCTATTGTTATAATCCTAATGTCTGTTATACTTTGGTGGAGATGTTGCCGCAGAAAGAGAAATTCATTAGCAAGTGAGCTGAAGAGTTTGGATCTGCGAACTGGTATATTTACTTTGCGGCAAATGAAAGCAGCAACAaacaactttgatgattccaATAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTACAAGGGCTTTCTGCCAGATGGCACTGTTATAGCAGTTAAGCAGCTTTCTTCTAAATCAAAGCAAGGGAATCGTGAGTTTATAAATGAGATAGGTTTGATATCTGCTTTGCAACACCCTCATCTTGTTAAACTCTATGGCTGTTGTGTTGAGGGAGATCAATTATTGCTGGTATATGAATACATGGAAAATAATAGCCTTGCGCATGCTTTATTTGGCCCTGAAGAAAGCCGACTAAAATTGGATTGGCCAACAAGGTACAAGATTTGTATTAGTATTGCTAAAGGTTTGGTTTATCTCCATGAAGAGTCAAGACTGAAGATTGTTCATAGAGACATTAAGGCCACTAATGTATTGCTTGATAAAGATCTAACCCCGAAGATATCTGACTTTGGTTTAGCCAAGCTTGATGAAGAGGACGATACCCACATAAACACAAGAATAGCTGGGACTTTtGGATATATGGCTCCAGAATATGCAATGCATGGTTATCTGACTTATAAAGCAGatatttatagctttggagTTCTTGCCTTGGAAATTGTTAGTGGAATGAGAAACACCACTTCCAGGCCTACAGAAGAATGCTTCTATCTTCTTGATTGgGCAAAGGAgttgaaagaagaagatgatctACTGAAACTAATTGATGAAAGATTGGATTCAGACTTCAACGAAGAGGAGGCAATCGTGATGATAAATGTGGCTCTCCTATGCACAAATCCCTCTCAGAAACTAAGGCCCACCATGTCATCAGTGGTAAGAATGCTTGAAAGCAGAACTGTTGTTCAGGAGTTGGTTTCAGATCAAAGTGAGACATTGGATGAGAAGAAGTCCGAGTCAATGCGATTATTTAACCACCAGACAGAAGAAAGCCAGTGTCTCTCAATGGATCAGTCATGGACTGATGTGTCCACGTCAGTCACAGATCTCAATCCTCGCCACCTGGATTCTTCTTACTGGGGGAAACAGAATTA 3005 0.4053 MTFPRALLLSLLALCFVASSYGLLLPDEVQALKDIAKTLGKTDWDFNVDPCSGESNWVKPLPLNGEENAVTCGNCSLVNGTNFCHVVSIVLKQENLNGTLPSDLGRFPYLYEIDLTRNYLNGTIPKEWGSIKLINISLLGNRLTGPIPKELGNITTLKSLVLEYNQFSGNIPPELGNLIQIERLFLTSNNFTGDVPATFERLTALKDVRIGDNHLSGTIPNFIQNWTRLEKLVIQGSGLSGPIPSGISFLTNLIDLRITDLQNGTDSTFPQLANSTSLQTLILRSCNINGTLPEYLGNMRSLITIDLSFNKLSGTIPSSYYGLRKSQYLYLTGNLLTGPVPDWTDQAGAVDLSYNNFSVSNSGQQTCQTGSVNLFSSSSMDNDLGIPCLGSASCPKYWYSLLINCGGKQVSVNGNTYDDDSDAGGPARFWESATNWAESNTGHFMDNTRSPYYTWSNSSGLSMTNAELYTDARVSPISLTYYGFCLGNGSYTVNLHFAEIMFTDDTTYGSLGRRVFDVYIQGKLVLKDFNIAREAGGVDKAIIKNFTAIVTRSTLEIRFYWAGKGTIDLPFRSVYGPLISAISVVPDFTPPLTPSEDGSSLATGAVVAIVAAGAIVIILMSVILWWRCCRRKRNSLASELKSLDLRTGIFTLRQMKAATNNFDDSNKIGEGGFGPVYKGFLPDGTVIAVKQLSSKSKQGNREFINEIGLISALQHPHLVKLYGCCVEGDQLLLVYEYMENNSLAHALFGPEESRLKLDWPTRYKICISIAKGLVYLHEESRLKIVHRDIKATNVLLDKDLTPKISDFGLAKLDEEDDTHINTRIAGTFGYMAPEYAMHGYLTYKADIYSFGVLALEIVSGMRNTTSRPTEECFYLLDWAKELKEEDDLLKLIDERLDSDFNEEEAIVMINVALLCTNPSQKLRPTMSSVVRMLESRTVVQELVSDQSETLDEKKSESMRLFNHQTEESQCLSMDQSWTDVSTSVTDLNPRHLDSSYWGKQN 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00967 1001 SMART serkin_6 662 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00967 1001 Gene3D Transferase(Phosphotransferase) domain 1 738 951 - -
Bva09g00967 1001 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 73 288 - -
Bva09g00967 1001 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 379 970 - -
Bva09g00967 1001 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Bva09g00967 1001 Gene3D Ribonuclease Inhibitor 196 261 IPR032675 -
Bva09g00967 1001 Gene3D Ribonuclease Inhibitor 262 383 IPR032675 -
Bva09g00967 1001 ProSiteProfiles Protein kinase domain profile. 662 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00967 1001 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 73 288 - -
Bva09g00967 1001 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 379 970 - -
Bva09g00967 1001 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 288 342 - -
Bva09g00967 1001 SUPERFAMILY Protein kinase-like (PK-like) 647 935 IPR011009 -
Bva09g00967 1001 SUPERFAMILY L domain-like 81 342 - -
Bva09g00967 1001 CDD STKc_IRAK 668 934 - -
Bva09g00967 1001 Gene3D Ribonuclease Inhibitor 28 195 IPR032675 -
Bva09g00967 1001 Pfam Protein tyrosine and serine/threonine kinase 666 933 IPR001245 GO:0004672|GO:0006468
Bva09g00967 1001 Pfam Leucine rich repeat 277 336 IPR001611 GO:0005515
Bva09g00967 1001 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 288 342 - -
Bva09g00967 1001 Pfam Malectin domain 400 582 IPR021720 -
Bva09g00967 1001 Gene3D Phosphorylase Kinase; domain 1 626 737 - -
Bva09g00967 1001 Gene3D - 399 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00967 Bva-Chr9 4969905 4978678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00967 19 986 Receptor kinase-like Gene Family AT1G53420 53.689 0.0 1003
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva09g00967 PK_Tyr_Ser-Thr 4.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00967 - - gmx:732563 1307.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00967 09 4969905 4978678 Bva09g00967 09 4969905 4978678 ECH