Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00965 ATGGAGTTTCTGATTTCAATCTCCAAACTCGTCtctgttttgattttctcaGTTCTGGTTTTGAATTGCTTCACAGAGTTTGGATCCAACGCTCAACTTTTACCACAAGACGAAGTGAATGCTCTACAAGCAATATCAGATAAACTAGAGAACTTGAATTGGAGGGTTACCCAACGTTCTTGCATTGCTGGTGAAGGATTTACCAATCAGAGTATTGTAGGGGATGACATTATAAGAAATGTCACATGCAATTGTTCTTTTGGAAATGCCACCGTTTCCATTTGTCATGTTACAAACATCATGCTGAAGGGTCTCAATCTCTCTGGAGTGTTTCCTAGCGAATTTGGAAATCTCACTCAACTGACAGAACTCGACCTCACTCGCAACTACATCAATGGCTCGCTTCCGGCGAGTCTTTCAGGCACCCCTCTTGTCACTCTGTCCCTCTTGGGAAATCGAATATCTGGTTCAGTTCCCCCAGTAATTGGTGACATTGCTACTCTGGAGGCGCTGATCTtggaaaataatcaatttggaGGACCTCTTCCTTCCAACCTTGGAAATTTGAGCCGGTTAAGAAGACTACTcctttcttcaaataattttacaggGACAATACCGGAATCATTTCGAAATCTGAAGAATCTAACCGATTTTAGGATAGATGGGAGTACATTATCAGGACAGATACCAAGTTTTATTGGGAACTGGACCAAACTTGATAGATTGGATTTGCAAGGCACATCCATGGAAGGGCCAATTCCTTCCACCATAGCTTTGTTGACAAATTTGACTGAATTgAGAATATCTGATTTGAAAGGAACAACCATTGGATTTCCTAACCTGGAGGATTTGAAAAGCTTGGAACAGTTGGTATTGAGAAATTGCTTGATCACTGGTGGCATTCCAGATTACATTGgtcaaatgacaaaattagtTACTCTAGATCTGAGCTTTAACAGGTTGACTGGTTCAATCCCAAATTCCATCGAGGCCTTGACAGCTTTAGATTACTTGTTTCTGACCAACAATTCTCTGAATGGAACAATCCCAGATTGGATAgtgaaaaacaataataaaatGGATCTATCTTACAACAATTTCACAGGTTCTACTGCAGCAAATTGCCAGCTCAACAACGTGAACTTGGCTTCCAGCTACTCATCTTCAGCAAACAATTCAGTTTCTTGGTGCTTTAGGAAGGATCTCCCTTGTAATGGAAATCCCCAGTATTATTCATTGTTCATAAATTGTGGAGGGTCGGTAATGGAGTATGAGAAGAATCAATATGAAGATGACCGCAACCCAGTGGGCATTTCAAACTTTGTTGATTCAGACCATTGGGCCTATAGCAGCACAGGAGTATTTCTGGGTGACGTTGATGCTCCTCTCTTAGCAACAAATACGTTTTCTTTGAATGTTAATGGTCCAGCCTATTACCAGACAGCTCGACTTGCTCCTATATCACTTAATTATTATGGGCTTTGCATGCTGAAGGGCAATTACAAAGTAAAACTTCACTTTGCTGAGATAATGTTTAGTAATGACAAGAACTATAGCAGCCTTGGAAAGCGCATTTTTGATGTTTCAATTCAAGGTAATCTATATTTGAAAGATTTTAACATTATGGAAGAAGCTGGCGGTGCTGGTATAGGCATCACAAGGGAATTCGATGTTGATGTCAATGGGAGCACCTTGGAGATCCATTTATACTGGGCAGGAAAAGGAACAAATGCCATTCCTGAACGAGGTGTATATGGACCTCTTATTTCTGCTATCTCAGTGACCCCAAATTTCAAAGTTCCTTCAAATGGTGGGCTCTCAGCTGGAGCTATTGCTGGAATAGTGATTGCTTCATGTGTGCTCCTTATACTGATCATACTCATTGTTCTTCGAAAGAAGGGTTACCTTGGTGGACAGGATCCACAAGACAAAGAACTTCTGGATCTCAAAACAGGCTATTTCTCattaagacaaattaaagcTGCCACTAATAACTTTGATCCAGCAAACAAGATAGGTGAAGGAGGCTTTGGTCCAGTATATAAGGGTGTGCTGTCAGATGGTGCTGTGATTGCTGTTAAGCAGCTATCCTCAAAATCGAAGCAAGGGAACCGTGAATTTGTTAATGAGATAGGAATGATATCTGCTTTGCAGCACCCAAACCTTGTGAAGCTTTATGGCTGCTGCATTGAAGGAAACCAGTTGTTGCTAATATATGAATACATGGAAAACAACAGTCTTGCTCGTGCACTTTTCGGCCGTGATGAACAGAGGCTACACTTGGATTGGCCGCGAAGAATGAAAATCAGTTTGGGGATAGCAAGGGGGTTAGCTTATCTTCACGAGGAATCAAGGTTGAAAATAGTGCACAGGGATATTAAGGCAACAAATGTCTTACTTGATAAGAATCTGAATGCCAAGATCTCTGACTTTGGTTTAGCTAAGcttgatgaagaagagaataCCCATATCAGTACAAGAATAGCTGGAACAATaGGATACATGGCTCCCGAATATGCAATGCGAGGTTACTTGACTGATAAAGCAGACGTTTATAGCTTTGGAGTTGTTGCTTTGGAGATTGTTAGTGGAAAGAGCAACACAAATTACCGGCCAAAGGAGGAGTTTGTCTATCTTCTTGATTGGGCATACGTGCTCCAAGAGCAAGGAAACCTTCTAGAGCTGGTGGATCCAGTTCTTGGTTCAAGCTTCTCGCCAGATGAGGCAATGAGAATGCTGAACTTGGCACTGCTGTGCACCAATCCGTCTCCAACTCTTCGACCAAGCATGTCATCTGTAGTGAGCATGCTTGAAGGGAAAACTCCAATCCAAGCACCAATTATCAAGCGTAAGGACTCAAGCCAGGATCCAAGATTCAAAGCCTTTGAGATGCTAACACAAGACAGCCAAGTTCAGATTTCTTCCACAATCTCACAAGAAAGTATAGAGCGAAGAGGCCAATCAACGGATGGACCATGGATGGACTCCTCTACTTCTCTTCCAAGTAGGGATGATTATTCTTCAACTGCTAAGCTTATTAAGGAATCTTA 3053 0.4026 MEFLISISKLVSVLIFSVLVLNCFTEFGSNAQLLPQDEVNALQAISDKLENLNWRVTQRSCIAGEGFTNQSIVGDDIIRNVTCNCSFGNATVSICHVTNIMLKGLNLSGVFPSEFGNLTQLTELDLTRNYINGSLPASLSGTPLVTLSLLGNRISGSVPPVIGDIATLEALILENNQFGGPLPSNLGNLSRLRRLLLSSNNFTGTIPESFRNLKNLTDFRIDGSTLSGQIPSFIGNWTKLDRLDLQGTSMEGPIPSTIALLTNLTELRISDLKGTTIGFPNLEDLKSLEQLVLRNCLITGGIPDYIGQMTKLVTLDLSFNRLTGSIPNSIEALTALDYLFLTNNSLNGTIPDWIVKNNNKMDLSYNNFTGSTAANCQLNNVNLASSYSSSANNSVSWCFRKDLPCNGNPQYYSLFINCGGSVMEYEKNQYEDDRNPVGISNFVDSDHWAYSSTGVFLGDVDAPLLATNTFSLNVNGPAYYQTARLAPISLNYYGLCMLKGNYKVKLHFAEIMFSNDKNYSSLGKRIFDVSIQGNLYLKDFNIMEEAGGAGIGITREFDVDVNGSTLEIHLYWAGKGTNAIPERGVYGPLISAISVTPNFKVPSNGGLSAGAIAGIVIASCVLLILIILIVLRKKGYLGGQDPQDKELLDLKTGYFSLRQIKAATNNFDPANKIGEGGFGPVYKGVLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNSLARALFGRDEQRLHLDWPRRMKISLGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPVLGSSFSPDEAMRMLNLALLCTNPSPTLRPSMSSVVSMLEGKTPIQAPIIKRKDSSQDPRFKAFEMLTQDSQVQISSTISQESIERRGQSTDGPWMDSSTSLPSRDDYSSTAKLIKES 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00965 1017 Gene3D Ribonuclease Inhibitor 199 274 IPR032675 -
Bva09g00965 1017 SMART serkin_6 667 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00965 1017 PANTHER - 75 303 - -
Bva09g00965 1017 PANTHER - 389 998 - -
Bva09g00965 1017 MobiDBLite consensus disorder prediction 972 1017 - -
Bva09g00965 1017 ProSiteProfiles Leucine-rich repeat profile. 311 333 IPR001611 GO:0005515
Bva09g00965 1017 MobiDBLite consensus disorder prediction 972 1007 - -
Bva09g00965 1017 Gene3D Ribonuclease Inhibitor 36 198 IPR032675 -
Bva09g00965 1017 SUPERFAMILY L domain-like 90 370 - -
Bva09g00965 1017 Gene3D Phosphorylase Kinase; domain 1 637 742 - -
Bva09g00965 1017 CDD STKc_IRAK 673 940 - -
Bva09g00965 1017 SUPERFAMILY Protein kinase-like (PK-like) 650 939 IPR011009 -
Bva09g00965 1017 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 75 303 - -
Bva09g00965 1017 Pfam Protein tyrosine and serine/threonine kinase 671 934 IPR001245 GO:0004672|GO:0006468
Bva09g00965 1017 Pfam Malectin domain 413 593 IPR021720 -
Bva09g00965 1017 ProSiteProfiles Protein kinase domain profile. 667 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00965 1017 Pfam Leucine Rich Repeat 191 213 IPR001611 GO:0005515
Bva09g00965 1017 Gene3D Transferase(Phosphotransferase) domain 1 743 952 - -
Bva09g00965 1017 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 389 998 - -
Bva09g00965 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Bva09g00965 1017 SMART LRR_typ_2 309 332 IPR003591 -
Bva09g00965 1017 SMART LRR_typ_2 189 212 IPR003591 -
Bva09g00965 1017 SMART LRR_typ_2 118 141 IPR003591 -
Bva09g00965 1017 SMART LRR_typ_2 333 357 IPR003591 -
Bva09g00965 1017 Gene3D - 410 598 - -
Bva09g00965 1017 Gene3D Ribonuclease Inhibitor 275 400 IPR032675 -
Bva09g00965 1017 Pfam Leucine rich repeat 287 346 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00965 Bva-Chr9 4946572 4954942 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00965 1 1005 Receptor kinase-like Gene Family AT1G53440 63.878 0.0 1285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva09g00965 PK_Tyr_Ser-Thr 1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00965 - - gmx:100815226 1395.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00965 09 4946572 4954942 Bva09g00965 09 4946572 4954942 ECH