Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00935 ATGGCGGGGGTTGGACCACTTACTCAGGACTGGGAGCCAGTAGTGATCCGGAAGAAGGCACCAACAGCTGCGGCCAAGAAGGATGAGAAAGCTGTCAACGCTGCCCGGCGTTCCGGCGCCGAGATTGAAACCgtaaaaaaatCAAATGCTGGGAGTAACAGAGCTGCCTCTAGCAGCACTACTTTAAACACAAGGAAGCTTGATGAGGAAACTGAGAATCTTCACCATGATCGGGTACCAACTGAATTGAAGAAAGCCATTATGCAGGCTCGGTTGGATAAAAAGCTTACTCAAGCTCAACTGGCTCAGatgataaatgaaaaacCTCAAGTTATACAGGAATATGAATCTGGCAAAGCCATTCCTAATCAGCAAATAATTTCCAAACTGGAGAGAGCTCTTGGTACAAAACTGCGaggaaagaaatg 428 0.4439 MAGVGPLTQDWEPVVIRKKAPTAAAKKDEKAVNAARRSGAEIETVKKSNAGSNRAASSSTTLNTRKLDEETENLHHDRVPTELKKAIMQARLDKKLTQAQLAQMINEKPQVIQEYESGKAIPNQQIISKLERALGTKLRGKK 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00935 142 ProSiteProfiles Cro/C1-type HTH domain profile. 87 141 IPR001387 -
Bva09g00935 142 MobiDBLite consensus disorder prediction 45 64 - -
Bva09g00935 142 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 1 142 - -
Bva09g00935 142 MobiDBLite consensus disorder prediction 65 80 - -
Bva09g00935 142 Gene3D - 71 142 IPR010982 GO:0003677
Bva09g00935 142 MobiDBLite consensus disorder prediction 21 43 - -
Bva09g00935 142 MobiDBLite consensus disorder prediction 21 80 - -
Bva09g00935 142 Pfam Helix-turn-helix 87 138 IPR001387 -
Bva09g00935 142 PANTHER MULTIPROTEIN BRIDGING FACTOR 1B 1 142 - -
Bva09g00935 142 Pfam Multiprotein bridging factor 1 9 79 IPR013729 -
Bva09g00935 142 SUPERFAMILY lambda repressor-like DNA-binding domains 80 138 IPR010982 GO:0003677
Bva09g00935 142 SMART mbf_short4 86 141 IPR001387 -
Bva09g00935 142 CDD HTH_XRE 85 138 IPR001387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00935 Bva-Chr9 4810272 4812238 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Bva09g00935 MBF1 2.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00935 K03627 - tcc:18594235 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00935 09 4810272 4812238 Bva09g00935 09 4810272 4812238 ECH