Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00924 ATGTACGACTCTAAGGCAATTCTCCCTGCAATGGCCTCTCTTGCAGCCTCAGCTATGCTGATACGTAGCATTTCCAATGACTTCATTCCAAATGAAATCCgcaacttctttttctccaaacTCCATAACCTTTCTTACCACTTCTCTTCACTATTCACCATTGTAATAGAAGAGTTTCAAGGGATTGCAAAGAATGAAATGTTTGAGGCTGCAGAGGTCTATCTGGGCACCAAAGCCACTCTCTCAGCTCAAAGGGTCAGAGCCACAAAATCCGAGGATGACAAAAAACTAGCCTTCAGTGTAGATAGAGATGAAGAAGTGACTGATGTTCATGAAAATGTTCAATTGAAGTGGAAATTTGTCTGCGTTCAGCTGGAAGACTCGTCTGGTTTTCGGCATCCTAATAACTATGGTGCTGCTTTAAGATCTGAACTGAGATCTTATGAGCTAACTTTTCACAAGAAACACAAAGAGAAGGTGTTTGATTCATATCTTCCCTATGTATTGGAGAAAGCAAAGCATATCAAACAGCAGCACAAGGCTGTGAAGCTGCACACAGTTGAATATGAATATTGGAGTCGCTGTGCTGTTAACTTGAGCCATCCAATGACCTTCAGCACTCTAGCAATGGATGCAGGCCGTAAGAAGGAACTGATGGATGATTTGGACAAGTTTGTTAATGGGAAGCAGTTCTATAGAAGAACTGGAAAAGCTTGGAAACGAGGGTATTTGCTGTATGGCCCTCCCGGCACGGGCAAATCTAGCTTGATTGCCGCCATGGCCAATCACCTAAACtatgatatatatgatttaGATCTCACTGCTGTCAGTACTAATAGGGACTTGAAGTCTCTGCTGCTTGGCATGTCCAACAGGTCCATTCTTGTGATCGAGGATATTGATTGCACTATAAAGTTGCAGAACCGAGAAGTAGATGATGAATTGGCCAATAATGGTGACAATAAGGTGACACTTTCAGGACTCTTGAACGTCATAGatggtctttggtcatgttGTGGCGAGGAACGCATTATCATTTTCACAACTAACCATAAAGAGAAGCTGGATCCTGCTTTGCTGAGGCCTGGCCGAATGGACATGCATATACACATGTCCTATTGCAACTTCTCTACTTTCGAGCAATTGGCCATGAGTTATCTTGGAATTTCCCAACACAAAATCTTCCAACAAATTGAAGGGCTTATAGGAGAAGTTCAAGTCACTCCTGCAGAAATTGCTGGAGGGCTGTCTAAGAGTGCTGTTGATGCAGAACATTCACTCCAGAACCTGGTCAAGTTCCTTgacaacaagaaaatgaagcagCAGGACGAGGCCAAAAATGACCAATACGTCAAAGATcatgaacaagaagaaaaata 1379 0.4032 MYDSKAILPAMASLAASAMLIRSISNDFIPNEIRNFFFSKLHNLSYHFSSLFTIVIEEFQGIAKNEMFEAAEVYLGTKATLSAQRVRATKSEDDKKLAFSVDRDEEVTDVHENVQLKWKFVCVQLEDSSGFRHPNNYGAALRSELRSYELTFHKKHKEKVFDSYLPYVLEKAKHIKQQHKAVKLHTVEYEYWSRCAVNLSHPMTFSTLAMDAGRKKELMDDLDKFVNGKQFYRRTGKAWKRGYLLYGPPGTGKSSLIAAMANHLNYDIYDLDLTAVSTNRDLKSLLLGMSNRSILVIEDIDCTIKLQNREVDDELANNGDNKVTLSGLLNVIDGLWSCCGEERIIIFTTNHKEKLDPALLRPGRMDMHIHMSYCNFSTFEQLAMSYLGISQHKIFQQIEGLIGEVQVTPAEIAGGLSKSAVDAEHSLQNLVKFLDNKKMKQQDEAKNDQYVKDHEQEEK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00924 459 MobiDBLite consensus disorder prediction 438 459 - -
Bva09g00924 459 PANTHER BCS1 AAA-TYPE ATPASE 5 446 - -
Bva09g00924 459 ProSitePatterns AAA-protein family signature. 343 361 IPR003960 GO:0005524|GO:0016887
Bva09g00924 459 Gene3D - 370 440 - -
Bva09g00924 459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 416 IPR027417 -
Bva09g00924 459 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 5 446 - -
Bva09g00924 459 Gene3D - 192 369 IPR027417 -
Bva09g00924 459 CDD AAA 240 373 - -
Bva09g00924 459 Pfam Domain associated at C-terminal with AAA 29 122 IPR025753 -
Bva09g00924 459 SMART AAA_5 239 375 IPR003593 -
Bva09g00924 459 Pfam ATPase family associated with various cellular activities (AAA) 244 372 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00924 Bva-Chr9 4757075 4759151 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00924 211 375 Calmodulin-binding Proteins AT3G56690 27.869 1.64e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00924 K08900 - gmx:100778503 630.172