Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00919 ATGACTTGTTTCTGTCTTCCTTTCAGAAGGAAACGATCTTGCCCACGCTCACAATCAACTGAACTTGATGAAGAGGTTTCAGACATTCAAAATGTCAACATTTATACTTACAAGGAATTGCATATTGCCACTGAAGGTTTTAGTTCATCAAACAAGATAGGGGAGGGAGGTTTTGGATCCGTTTATAAGGGAAAACTGAGAAATAATACTCTGGCTGCTATAAAGGTGTTATCATCTGACTCAAGGCAAGGGGTTCGAGAGTTCTTGACAGAAATCAAGGTGATAACTAGCATAGAGCATGaaaacctggttaagttgtaCGGATGCTGTGTGGAAGGAAAACACAGGATTTTGGTATATGGCTATCTTGAAAATAACAGCCTAGCACAAACACTTCTTGGTGGAGGCCATAGCAGCATCCAATTCAGTTGGCATTTGCGGAGGAACATTTGCATCGGTGTTGCCCGGGGCCTTACCTTCCTCCATGAAGAAGTTAGGCCACATATTATTCATAGAGACATTAAAGCTAGCAATATACTACTTGACAAAGACCTCAAGCCaataatttcagattttgGACTTGCAAGGCTTATTTCGCCAAATCTGTCCCATATAACTACACTTGTTGCTGGAACTGCTGGTTATCTGGCACCGGAGTATGCAATAAGAAATCAAGTGACAAGAAAATCAGATGTATACAGTTTTGGAGTTCTACTACTAGAAATTGTTAGTGGGAGGAACAACACGAATAGACGCTTACCTGCTGAAGAACAGTATCTTGTAGCAAGGGCATGGAATTTGTATGAGGCTGGAGAGCTGGAGAGGTTGGTTGATGCATTCCCGGATGGAGATGTCAATATTGAGGAGGCATGCAGATTTTGTAAGATTGGCCTTCTCTGTACTCAGGATTCTCCGAAGCTCCGGCCATCGATGTCTACTGTGCTTGACATGCTGATAGGTGAAACAGACGTGCATGGTGagaacgtagaaagaccaggCCTGCTATTTGAGTTCGTGGATGGCCATGACCAGGGCAAACAGAAAATGAAGGCTGAAGTGGAAAATTCATCCTTCATTGGTGGCTCAGGAAAGCAACAAGATTCAAATTCATCCGAAACCGTTACCTCTTATGGTACCATGACCTTCACTTCAATTTATGATCGGAGCAATTA 1172 0.4096 MTCFCLPFRRKRSCPRSQSTELDEEVSDIQNVNIYTYKELHIATEGFSSSNKIGEGGFGSVYKGKLRNNTLAAIKVLSSDSRQGVREFLTEIKVITSIEHENLVKLYGCCVEGKHRILVYGYLENNSLAQTLLGGGHSSIQFSWHLRRNICIGVARGLTFLHEEVRPHIIHRDIKASNILLDKDLKPIISDFGLARLISPNLSHITTLVAGTAGYLAPEYAIRNQVTRKSDVYSFGVLLLEIVSGRNNTNRRLPAEEQYLVARAWNLYEAGELERLVDAFPDGDVNIEEACRFCKIGLLCTQDSPKLRPSMSTVLDMLIGETDVHGENVERPGLLFEFVDGHDQGKQKMKAEVENSSFIGGSGKQQDSNSSETVTSYGTMTFTSIYDRSN 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00919 390 Pfam Protein kinase domain 48 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00919 390 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Bva09g00919 390 PANTHER RECEPTOR-LIKE KINASE 2 376 - -
Bva09g00919 390 CDD STKc_IRAK 53 318 - -
Bva09g00919 390 Gene3D Transferase(Phosphotransferase) domain 1 123 329 - -
Bva09g00919 390 Gene3D Phosphorylase Kinase; domain 1 17 122 - -
Bva09g00919 390 SUPERFAMILY Protein kinase-like (PK-like) 25 318 IPR011009 -
Bva09g00919 390 SMART serkin_6 47 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00919 390 ProSiteProfiles Protein kinase domain profile. 47 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00919 390 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 376 - -
Bva09g00919 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00919 Bva-Chr9 4738487 4741168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00919 16 325 Receptor kinase-like Gene Family AT1G07650 51.757 4.05e-100 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva09g00919 Pkinase 4.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00919 - - gmx:100801735 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00919 09 4738487 4741168 Bva09g00919 09 4738487 4741168 ECH