Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00910 ATGGCAGGGATTTCTGGGAGAAACAGCAGCAGAACCAAGTTTCAGAGTGTTctggaagaggaaaaaaagaacaagGGTCTGAGTCTGGATCCTCAAAGGAATCATCATCACCACCATcagcagcaacagcaacagcaCCATCAGCATCAAAACCCAGCTCCAAATTCAAGGTATGTAGAGGAAGCAAGAGAAGAGGACGACGGCCAAATTTCCCCTTCACAGAAAGACCATCGCTTTCACCAGCAAGACCCAAGCTTTCATGTCCAGCTCCAATATCTCCACCCACAACTTCAAAATCAACCCCAGCAACACCAATCTTCTTATGGAGGTTTAGATACAGAGATAAATCCCTTGCAACCACCCAAAAAACGTTCTTTTCTCCCTCCTCCTTCGTCTTCTTCAGTCGAATATGCAAGAAAGATGGGAGAGACCAATCGCCAAGCAGCAACATCGTCGAGATTGGGGTTAAGAAGTGGAGGTGGAGAAATCGTAGAGGTCCAAGGAGGCCACATTGTGCGCTCCACGGGACGCAAAGATCGTCACAGCAAGGTCTGCACAGCAAAGGGGCCAAGAGATCGAAGAGTTCGTCTCGCTGCTCACACTGCCATTCAATTCTACGACGTGCAAGACCGTCTCGGTTACGACCGACCAAGCAAAGCCGTCGATTGGCTCATCAAGAAGGCAAAAAACGCCATAGACGAGCTTGCAGAGCTTCCCGCATGGCGTCCGAGTACTTCTGTGTTAAACTCAAACGCTTCGCAGCAGAATCAGCAGGAGCAGCAGAACCAGCAGATGAACGAGGAGAACGACAACGACTCCCATGGCGTTCACCGTGCTACGGTGGATGCAGTTTCTCCTGGTAACCGAAGAACTGATTCACTGGTGGGAAACACCGCCGCCAGCGGTGGTGGGAGAATTGAAAGTGGTATCCGGAATCTTCAGCAGCAATTAGGTGAAAATCCGAATAACAGCGCGAGTTTTATTCCACCATCTTTGGACAACGACATTGCTGACATCAGGTCTTTCTTCCCAATGGGTGCGACGGCGGAGACGACTTCGTCGCCTATTCAGTTTCAGAATTACCCACCAGATTTGCTCTCGAGAACCAGCAGCCAAAACCAAGATCTGCGGCTCTCGCTTCAGTCCTTCCAGGACCCAATTCTGCTTCACCAAGCCCAGCAGCACCAAGCTCAGAGTCACCACCATCAGAATGAGCAAGTCCTGTTCTCTGGAACCCCACTTGGGTTCGATGGGACATCAACTGGGTGGTCAGAGCAGCACCACTCAGAGGAACATGGTCGTTTGCACAGAATGTTAGCTTGGAGTGCTGGTTCTGATACTGGTAATACTGGCGGTGGTGGTAGCGGCAGCGGAGGATTTCTCTTCAATTCACCGTCGCCGACTCCATCGCAGATGCCGCCGCCGCTTCAGCCGTTGTTCGGAGGCCAAAGCCAGTATCTTTCTCAGAGGGGACCCCTTCAGTCCAGTAACACCCCTTCGATTCGTGCTTGGATCGACGACCCATCAATCACCACAGCCACCGTCACCGATCATCGCCACCACTATCTTCCACAGGCAATCCATCATCAGACTTCTCTATCGGGCATCGGATTCCCCACTTCCGGTGGGTTCTCCGGTTTCCGCATTCCAGCACGAATCCAGGGTGAAGAGGAACACGACGGCATATCTGACAAGCCGTCCTCTGCTTCCTCTGATTCTCGCCATTG 1727 0.5061 MAGISGRNSSRTKFQSVLEEEKKNKGLSLDPQRNHHHHHQQQQQQHHQHQNPAPNSRYVEEAREEDDGQISPSQKDHRFHQQDPSFHVQLQYLHPQLQNQPQQHQSSYGGLDTEINPLQPPKKRSFLPPPSSSSVEYARKMGETNRQAATSSRLGLRSGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKNAIDELAELPAWRPSTSVLNSNASQQNQQEQQNQQMNEENDNDSHGVHRATVDAVSPGNRRTDSLVGNTAASGGGRIESGIRNLQQQLGENPNNSASFIPPSLDNDIADIRSFFPMGATAETTSSPIQFQNYPPDLLSRTSSQNQDLRLSLQSFQDPILLHQAQQHQAQSHHHQNEQVLFSGTPLGFDGTSTGWSEQHHSEEHGRLHRMLAWSAGSDTGNTGGGGSGSGGFLFNSPSPTPSQMPPPLQPLFGGQSQYLSQRGPLQSSNTPSIRAWIDDPSITTATVTDHRHHYLPQAIHHQTSLSGIGFPTSGGFSGFRIPARIQGEEEHDGISDKPSSASSDSRH 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00910 575 MobiDBLite consensus disorder prediction 128 154 - -
Bva09g00910 575 MobiDBLite consensus disorder prediction 447 466 - -
Bva09g00910 575 MobiDBLite consensus disorder prediction 97 156 - -
Bva09g00910 575 MobiDBLite consensus disorder prediction 14 37 - -
Bva09g00910 575 Coils Coil 248 271 - -
Bva09g00910 575 MobiDBLite consensus disorder prediction 58 81 - -
Bva09g00910 575 MobiDBLite consensus disorder prediction 246 306 - -
Bva09g00910 575 MobiDBLite consensus disorder prediction 447 501 - -
Bva09g00910 575 Pfam TCP family transcription factor 176 272 IPR017887 -
Bva09g00910 575 MobiDBLite consensus disorder prediction 246 269 - -
Bva09g00910 575 MobiDBLite consensus disorder prediction 477 501 - -
Bva09g00910 575 PANTHER TRANSCRIPTION FACTOR TCP4 141 575 - -
Bva09g00910 575 MobiDBLite consensus disorder prediction 554 575 - -
Bva09g00910 575 ProSiteProfiles TCP domain profile. 177 235 IPR017887 -
Bva09g00910 575 MobiDBLite consensus disorder prediction 1 81 - -
Bva09g00910 575 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 141 575 IPR005333 GO:0003700
Bva09g00910 575 MobiDBLite consensus disorder prediction 97 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00910 Bva-Chr9 4691278 4693117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00910 159 575 TCP Transcription Factor Family AT3G15030 50.345 2.77e-104 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bva09g00910 TCP 1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00910 - - jre:108992497 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00910 09 4691278 4693117 Bva07g01686 07 15880374 15883622 ECH
Bva09g00689 09 3520801 3522848 Bva09g00910 09 4691278 4693117 ECH
Bva07g01931 07 17144668 17147874 Bva09g00910 09 4691278 4693117 ECH
Bva09g00910 09 4691278 4693117 Bva09g00910 09 4691278 4693117 ECH