Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00897 ATGAGCAGCGAGTCCAGGAAGAAGCCTAAGCAAGCTCAGCTTAATCCCAACTGGGCTCAGCTCCAACAAACGCTGAAAGATCATGCGTCAAAAGTTTCGGCGCACTTAAGAAGTTCAGCAACTGAGACACCAAAATCAATATTGGGGAAGCTTAAGGATAGACCAGATGCGGAGTCCAATGGTTGTCAGATGAATCCTCTTACTCCTGTGAATGATGATTGCAGTCTGACTGATGCAGTAGCCATGGATTGTGAAATGGTTGGCGTTGGTCAAGGAAACAAAAGTGCCCTGGGAAGAGTAACACTGGTTAACAAATGGGGCAATGTAATTTATGATGAGTTTGTTCGCCCGGTTGAGCGTGTTGTCGACTTCCGCACTAAAATTAGTGGCATACGACCTCGAGACTTGAAAAAAGGAAAAGATTTTTGGACGGCTCAGAAGAAAGTGGCAGAGTTTATCAAAGGAAGGATACTTGTAGGTCATGCTTTGCACAATGATTTTAAGGCATTATTATTAAGTCACCCCAAAAAGGATGTGCGCGATACTTCTGAGTACCAACCATTTCTAAAGGAAGGTGGCAAAAGAGCACTGCGACATCTTGCTGCTGAACTTCTTGGCGCTCAAATCCAAACGGGGGAGCACTGCCCTATAGAAGATGCCCGTGCTGCCATGCTCCTTTATCAAAAGAACAGAAAAGCATGGGAGAAGAGTGTAAAAGATCAATTGCGGCTCAAACTGAAGCAAAAGAAGCGGAAGCCAAACAAGAAACGAAAGAAGGAAGATGCCTTAAATGTCAACCACACTGGATA 809 0.4462 MSSESRKKPKQAQLNPNWAQLQQTLKDHASKVSAHLRSSATETPKSILGKLKDRPDAESNGCQMNPLTPVNDDCSLTDAVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPVERVVDFRTKISGIRPRDLKKGKDFWTAQKKVAEFIKGRILVGHALHNDFKALLLSHPKKDVRDTSEYQPFLKEGGKRALRHLAAELLGAQIQTGEHCPIEDARAAMLLYQKNRKAWEKSVKDQLRLKLKQKKRKPNKKRKKEDALNVNHTG 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00897 269 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 13 256 - -
Bva09g00897 269 PANTHER RNA EXONUCLEASE 4 13 256 - -
Bva09g00897 269 SMART exoiiiendus 78 236 IPR013520 -
Bva09g00897 269 MobiDBLite consensus disorder prediction 25 45 - -
Bva09g00897 269 Gene3D - 75 254 IPR036397 GO:0003676
Bva09g00897 269 Pfam Exonuclease 80 227 IPR013520 -
Bva09g00897 269 MobiDBLite consensus disorder prediction 25 68 - -
Bva09g00897 269 MobiDBLite consensus disorder prediction 242 269 - -
Bva09g00897 269 SUPERFAMILY Ribonuclease H-like 79 228 IPR012337 -
Bva09g00897 269 MobiDBLite consensus disorder prediction 243 257 - -
Bva09g00897 269 CDD REX4_like 80 228 IPR037431 GO:0006364|GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00897 Bva-Chr9 4628010 4630313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00897 79 231 C2H2 Transcription Factor Family AT5G40310 34.911 6.29e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00897 K18327 - gmx:100819122 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00897 09 4628010 4630313 Bva09g00897 09 4628010 4630313 ECH