Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00882 ATGGCTGAGATAGCGGCGTTAGCAGAGTTGGCAGGATCAAAATTTGGTTCGTTGGAGCTCATTGGACAAGGATCATTTGGTGATGTCTATAAGGGGTTTGACAAGGAGCTGAGCAAAGAAGTTGCCATCAAAATGATTGATTTGGAAGAATCAGAGGATGAGATTGAGGACATTCAGAAGGAAATTCAAGTTCTATCACAGTGCCGGTGTCCATACATTACAGAATATTATGGTTCCTATCTCAATCAAACTAAACTTTGGATAATAATGGAATACATGGCCGGAGGCTCTGTTGCTGACCTACTTCTATCAGGTCCTCCACTTGATGAAATGTCAATTGCTTGCATTTTATGTGACTTGCTGCATGCAATTGACTACCTACATGCTGAAGGGAAAATTCACAGGGATATTAAAGCGGCAAACATTTTATTGACTGAGAATGGTGATGTAAAGGTTGcagattttggtgtttctgCACAGCTAACAAGGACCATATCAAGGAGaaagACATTTGTTGGAACCCCATTTTGGATGGCACCAGAGGTTATTCAGAATTTAGAAGGATATAATGAGAAGGCGGACATCTGGTCTCTGGGGATCACTGCAATTGAAATGGCTAAAGGGGAGCCTCCTCTTGCTGATCTTCATCCTATGAGAGTGCTTTTTATCATTCCCCGAGAGAATCCACCACAGTTAGATGAGCATTTTTCTCGTCCCTTGAAAGAATTTGTGTCGTTGTGTTTAAAGAAGGTTCCTGCTGAGaGGCCAAGTGCTAAGGAACTGCTTAAACACCGGTTTATTCGCAATGCCAGGAAGAGTCCAAAGCTTTCGGAGAGAATAAGGGAGCGTCCAAAGTACCAAATAAAGGAAGATAATCAGTTATCTAGAAATGGTCCAAGAGGGACAGGGGAGGCATCTGATACCATGAAGGCATCAAAAGTTTCAAGAGTTGAAGAAACTCTTCGGTCCAGTGGTCCAGGTAAAACCCTGAAAAATTCTGGATGGGACTTCAGCATTGGTGGTTCACAGGGTTCTGGTACAATTCGTAGTGTTCCACGACTGCCTCAGTATAGAGATAgtaagaaaacagaaatttCACCTAATCACGCTACCCAAAGAAAACCTCCTGAGAGTGGCTATCAAGGGGCATCTACATATAAAAGTGCACTAAATGAAGCTTCAGAAACATCCTTGGGGAAAGATGTTAGAGTTCCACACCATGATGAACGTCAGAATAATCACCTTGAGGATGATGACTTGTCTTGGAATGGATCAGGAACTGTTGTTATTCGATCTCCAAAAGGATCACagccttcaattttttctgaCAGAAGCCCCCAGTCAAGCAGCAGTTATGCTTCTTTTGAAGATGCTTCTACCAGTGGAACTGTTGTTGTCCGTGGACAACCTGATGAGTTCGATTCTCCACAGACACCAAGGTCCAGACTTGGGCTTCATGAGAGAACTTCAATTGCCTCTCTGGAAGATAGTGCTACAAACCTTGCAGAgGCAAGGGCTGCTATGCAAGGAGGGCAAAAGAAGGGCAATGCTCGAGAGAGACTTGGGCTAGGAAAGATCAGCAGTGAGATGGTAGAAAGCAGGAGAGACCAAATGACAAGCAGTTCTGATTCTTCAAGaAAATCTCgtgaatacattgatgtacaAAAGGGAATTTCAAGATCACGTCATGATGACGAAGAAAGCGTCAAAATTACATCATCTTCTGCTCCATTATCAGTTTTACTTATTCCTTCTTTAAAAGAGGCCATTCCTGACGATCCAGAAGGGTCAACAATACAAGCAGTCATTAGTTCACTCATAAATATGGAGCGGACGAAACATGAATCCTGTGATATTCTTGTGAAAAATTTGCTTCAGCGGTTGGCAAGTTCGAGAGAATCTCCATTGAAAGACTTGCAGGAGCTTGCTGCCAATATGTTCGTCAAAATCAAGTCAACACCTGAAGAATCCAGAAATGTGAATACAGAAGCTGATAACAGGAAGAAACAACAGAGCAAGGAATTTCATTCAAATAGCAACTTAAGCCCACTTGCAAGATTTCTCCTTTCGAGATGGCAAGGCCAAACCTCACGAGATCTAAATCCAACTTG 2111 0.4126 MAEIAALAELAGSKFGSLELIGQGSFGDVYKGFDKELSKEVAIKMIDLEESEDEIEDIQKEIQVLSQCRCPYITEYYGSYLNQTKLWIIMEYMAGGSVADLLLSGPPLDEMSIACILCDLLHAIDYLHAEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNLEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPLKEFVSLCLKKVPAERPSAKELLKHRFIRNARKSPKLSERIRERPKYQIKEDNQLSRNGPRGTGEASDTMKASKVSRVEETLRSSGPGKTLKNSGWDFSIGGSQGSGTIRSVPRLPQYRDSKKTEISPNHATQRKPPESGYQGASTYKSALNEASETSLGKDVRVPHHDERQNNHLEDDDLSWNGSGTVVIRSPKGSQPSIFSDRSPQSSSSYASFEDASTSGTVVVRGQPDEFDSPQTPRSRLGLHERTSIASLEDSATNLAEARAAMQGGQKKGNARERLGLGKISSEMVESRRDQMTSSSDSSRKSREYIDVQKGISRSRHDDEESVKITSSSAPLSVLLIPSLKEAIPDDPEGSTIQAVISSLINMERTKHESCDILVKNLLQRLASSRESPLKDLQELAANMFVKIKSTPEESRNVNTEADNRKKQQSKEFHSNSNLSPLARFLLSRWQGQTSRDLNPT 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00882 703 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Bva09g00882 703 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00882 703 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00882 703 MobiDBLite consensus disorder prediction 273 384 - -
Bva09g00882 703 MobiDBLite consensus disorder prediction 507 550 - -
Bva09g00882 703 MobiDBLite consensus disorder prediction 653 678 - -
Bva09g00882 703 SUPERFAMILY Protein kinase-like (PK-like) 13 316 IPR011009 -
Bva09g00882 703 CDD STKc_MST3_like 13 287 - -
Bva09g00882 703 Pfam Protein kinase domain 18 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00882 703 Gene3D Transferase(Phosphotransferase) domain 1 12 300 - -
Bva09g00882 703 MobiDBLite consensus disorder prediction 412 490 - -
Bva09g00882 703 MobiDBLite consensus disorder prediction 273 290 - -
Bva09g00882 703 MobiDBLite consensus disorder prediction 425 466 - -
Bva09g00882 703 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 701 - -
Bva09g00882 703 MobiDBLite consensus disorder prediction 325 350 - -
Bva09g00882 703 MobiDBLite consensus disorder prediction 656 674 - -
Bva09g00882 703 MobiDBLite consensus disorder prediction 369 384 - -
Bva09g00882 703 Coils Coil 41 68 - -
Bva09g00882 703 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00882 Bva-Chr9 4548395 4557251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00882 1 700 MAP Kinase Kinase Kinase Kinase AT3G15220 63.494 0.0 841
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Bva09g00882 Pkinase 3.3e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00882 K08838 - gmx:100786501 1046.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00882 09 4548395 4557251 Bva09g00882 09 4548395 4557251 ECH