Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00877 ATGGTGCCGCGCAGATGTTTTTCGATGACTTTTCTCCAATGGGGTTTGTTTACTTGCTTGCTTTGTTTATCTCTGGGTCTTGGAAACCCAGCTTTATGCTGTGACCCACATGATTTATCGGCCCTGAAGGAATTCGCAGGAAACCTCACAAATGGGTCTATCATCACTGCATGGTCCAATGATGTTGGCTGCTGTAAATGGGTTGGAGTTGTCTGTGATAATGTGACTGATGGGCCAGCTACTAGTAGAGTGACTCAGTTGATTCTTCCCAGAATGGGTCTCAAAGGGACAATTTCAAGCTCTCTAGCTCAACTAGATCAGCTGAGCCTACTGGATCTTTCATTCAACCGTCTTCAAGGTCAAGTACCTGAGCAATTCTCCAAACTGAAGCAGTTGAAGTATCTTGACTTGAGCCACAACATGCTATCCGGACCAGTTCCTGTAGCACTTTCTGGTTTGCAATCCATTCAGATACTGAATATTTCTAGCAACCTATTTGTCGGAAATCTCTTTCAGCTGGGGGAATTTCCTCAGCTTGTTGCATTCAACGTAAGCAACAATTCATTCACAGGGCAGTTCAATTTTGGAATTTGCGGTTCCTCTAAGGGGCTCCATGTTATTGATATATCTTCAAATCATTTTGCTGGCGATCTTGAAGGCTTGGACAATTGCAACACATCTCTTCAACAGTTGCACTTGgatgataatttcttttcaggCCCTCTTCCAGATTCCATATATTCGTTGGCATCCTTGGAGCAACTCTCAGTTTGTACCAACAATTTCTCTGGCCTATTAGGCAAGGACCTCAGTAAGCTCTCTAGcctaaaatatcttataatttctgGAAACCAATTTTCAGGGGAAATCCCAGATGTGTTTGGGAGCTTATCGCGCCTAGAACTACTGATAGCACACTCTAATCTGTTCTCTGGGAGATTTCCTTCCACCTTGGCTTTATGCTCGAAGCTTAGGGTGCTTGATCTTCGAAATAATTCTTTAACGGGTCTTATTGATCTTAATTTTACTGGGTTGACTAATCTTTGCACTCTTGATCTTGCAACTAATCATTTTGTTGGACCCCTTCCAAACTCCTTGTCCTATTGCCACGAATTGAAAGTTTTGAGCCTTGCTAGGAATGAATTAAATGGCTCCATCCCTGAAAGTTATGCGAACCTCACTTCGCTTTCGTTTCTGTCCTTGTCGAACAACAGCTTAGAGAACTTATCTGGGGCATTGTCTGTGCTGCATCAGTGCAAAAATTTGAGCATTTTAATTCTCACCAAAAATTTCCGTGGGGAGGAAATTGCAAAAGATGTTCCAGGTTTTGAGAGCCTCACAACTCTAGCACTTGGAAATTGCGGTCTCAAGGGCCAAATTCCTGTTTGGCTATTGAGTTGCAGGAAATTGGAGGTGGTTGATTTGTCTTGGAACTTTTTGGAAGGTAGTATCCCTTCTTGGATTGGTCGGATGGATAATTTGTTCTACTTGGATTTctcaaataattctttcacAGGAGAGATTCCAAAAAGTTTGACGCAGTTGAGGGGCCTCATTTCTACAAATTACAgtagaccaaatctcactgGCACTGCTTCTGCCGGCATTCCTCTCTATGTTAAGAGAAATAAGAGTGCTAGTGGGCTTCCATATAATCAGGTCTCAAGTTTCCCTCCTTCAATACTCTTGAGCAATAACAGATTAAGCGGAATGATATGGCCTGAAATTGGGAGGTTGAAAGCACTGCATGTCTTGGACTTAAGCAGGAACCACATCACTGGTACCATTCCTAGCTCCATTTCAGAGATGGAGAACTTGGAGACACTAGATTTATCTTATAATGATCTCTATGGAACCATCCCTGCGCCTTTTAACAATCTCACATTCTTGTCAAAGTTCAGTGTGGCATATAATCGCTTGCATGGACCGATTCCAACTGGGGGACAGTTTCTAAGCTTTCCCAGTTCAAGCTTTGAGGGAAACCTGGGTCTTTGTCGGGAAATAGATTCTCCCTGCAATACTGTCAACAATATGAGGCCCAAtattgcttctgcttctggcagcaaatttagaaataatgtCCTTGGCATAACAATCAGTATAGGAATAGGGCTTGCACTGCTCCTTGCTATTATTCTGCTTAAAATATCCAAGAGGGATGAGGATAAGCCAGTTGATAACTTAGATGAGGAACTTAGCCGGCCAGGCAGGTTGTCTGAAGcactattttcttcaaaattggtgcttttccagaattcagattgCAAGGACCTCACTGTTGCTGATTTGTTGAAATCCACAAACAATTTCAGCCAAGCAAACATAATTGGTTGTGGTGGGTTTGGTCTGGTCTACAAAGCAAATCTTCCAAATGGCACAAAAGCTGCTATCAAGAGACTTTCTGGGGACTGTGGTCAGATGGAACGTGAATTTCAAGCTGAAGTGGAAGCCCTGTCAAGAGCTCAGCATAAGAACCTTGTAGCTCTTAAAGGTTATTGCCGGCATGGGAATGACAGATTGTTAATTTACTCCTACTTAGAGAATGGAAGCTTGGATTATTGGCTGCATGAAAATGTGGATGGAAATACACCTCTAAAGTGGGATGTAAGATTAAAGATTGCACAAGGAGCAGCCCGCGGATTAGCTTACTTACACAAGGGTTGCGAGCCATATATAGTTCATCGAGATGTTAAATCTAGCAACATACTTGTGGATGATAAATTTGAGGCCCATTTGGCTGATTTTGGTCTCTCAAGGCTGCTTCAACCATATGATACTCATGTCACAACTGATTTAGTTGGTACTTTAGGATATATTCCTCCGGAATACAGTCAAACGTTAACAGCAACCTTCAGAGGTGATGTTTACAGTTTTGGTGTTGTCCTTCTTGAGCTACTTACTGGCAGAAGGCCGGTAGAAGTTATCAAAGGGAAAAACTGCAGAAATCTGGTTTCTTGGGTGTTTCAGATGAAATCTGAGAAGCGGGAGCAGGAAATTTTTGATTCGGTCATTTGGGACAAGGATAATGAGAAACAGCTCATGGAGGTACTCGCCATTGCTGGCAAATGTCTAGACCAAGATCCAAGGCAGAGACCCGGTATTGAACAAGTTTCTTCATGGCTTGATGGTGTAGGATTTTATGTTTCTCAACAATG 3155 0.407 MVPRRCFSMTFLQWGLFTCLLCLSLGLGNPALCCDPHDLSALKEFAGNLTNGSIITAWSNDVGCCKWVGVVCDNVTDGPATSRVTQLILPRMGLKGTISSSLAQLDQLSLLDLSFNRLQGQVPEQFSKLKQLKYLDLSHNMLSGPVPVALSGLQSIQILNISSNLFVGNLFQLGEFPQLVAFNVSNNSFTGQFNFGICGSSKGLHVIDISSNHFAGDLEGLDNCNTSLQQLHLDDNFFSGPLPDSIYSLASLEQLSVCTNNFSGLLGKDLSKLSSLKYLIISGNQFSGEIPDVFGSLSRLELLIAHSNLFSGRFPSTLALCSKLRVLDLRNNSLTGLIDLNFTGLTNLCTLDLATNHFVGPLPNSLSYCHELKVLSLARNELNGSIPESYANLTSLSFLSLSNNSLENLSGALSVLHQCKNLSILILTKNFRGEEIAKDVPGFESLTTLALGNCGLKGQIPVWLLSCRKLEVVDLSWNFLEGSIPSWIGRMDNLFYLDFSNNSFTGEIPKSLTQLRGLISTNYSRPNLTGTASAGIPLYVKRNKSASGLPYNQVSSFPPSILLSNNRLSGMIWPEIGRLKALHVLDLSRNHITGTIPSSISEMENLETLDLSYNDLYGTIPAPFNNLTFLSKFSVAYNRLHGPIPTGGQFLSFPSSSFEGNLGLCREIDSPCNTVNNMRPNIASASGSKFRNNVLGITISIGIGLALLLAIILLKISKRDEDKPVDNLDEELSRPGRLSEALFSSKLVLFQNSDCKDLTVADLLKSTNNFSQANIIGCGGFGLVYKANLPNGTKAAIKRLSGDCGQMEREFQAEVEALSRAQHKNLVALKGYCRHGNDRLLIYSYLENGSLDYWLHENVDGNTPLKWDVRLKIAQGAARGLAYLHKGCEPYIVHRDVKSSNILVDDKFEAHLADFGLSRLLQPYDTHVTTDLVGTLGYIPPEYSQTLTATFRGDVYSFGVVLLELLTGRRPVEVIKGKNCRNLVSWVFQMKSEKREQEIFDSVIWDKDNEKQLMEVLAIAGKCLDQDPRQRPGIEQVSSWLDGVGFYVSQQ 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00877 1051 SMART LRR_typ_2 345 369 IPR003591 -
Bva09g00877 1051 SMART LRR_typ_2 321 344 IPR003591 -
Bva09g00877 1051 SMART LRR_typ_2 105 128 IPR003591 -
Bva09g00877 1051 SMART LRR_typ_2 579 603 IPR003591 -
Bva09g00877 1051 SMART LRR_typ_2 273 296 IPR003591 -
Bva09g00877 1051 SMART LRR_typ_2 129 152 IPR003591 -
Bva09g00877 1051 SMART LRR_typ_2 393 416 IPR003591 -
Bva09g00877 1051 SMART LRR_typ_2 249 272 IPR003591 -
Bva09g00877 1051 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 173 282 - -
Bva09g00877 1051 ProSitePatterns Serine/Threonine protein kinases active-site signature. 892 904 IPR008271 GO:0004672|GO:0006468
Bva09g00877 1051 Gene3D Ribonuclease Inhibitor 32 262 IPR032675 -
Bva09g00877 1051 Pfam Leucine rich repeat 107 165 IPR001611 GO:0005515
Bva09g00877 1051 Pfam Leucine rich repeat 323 382 IPR001611 GO:0005515
Bva09g00877 1051 Pfam Leucine rich repeat 561 616 IPR001611 GO:0005515
Bva09g00877 1051 Pfam Leucine rich repeat 227 286 IPR001611 GO:0005515
Bva09g00877 1051 PANTHER PHYTOSULFOKINE RECEPTOR 2 561 614 - -
Bva09g00877 1051 PANTHER PHYTOSULFOKINE RECEPTOR 2 615 1044 - -
Bva09g00877 1051 Gene3D Ribonuclease Inhibitor 263 364 IPR032675 -
Bva09g00877 1051 SUPERFAMILY L domain-like 34 265 - -
Bva09g00877 1051 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Bva09g00877 1051 PANTHER PHYTOSULFOKINE RECEPTOR 2 32 164 - -
Bva09g00877 1051 PANTHER PHYTOSULFOKINE RECEPTOR 2 282 440 - -
Bva09g00877 1051 ProSiteProfiles Leucine-rich repeat profile. 323 344 IPR001611 GO:0005515
Bva09g00877 1051 ProSitePatterns Protein kinases ATP-binding region signature. 776 798 IPR017441 GO:0005524
Bva09g00877 1051 SUPERFAMILY L domain-like 204 533 - -
Bva09g00877 1051 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 164 - -
Bva09g00877 1051 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 282 440 - -
Bva09g00877 1051 SUPERFAMILY Protein kinase-like (PK-like) 752 1041 IPR011009 -
Bva09g00877 1051 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 561 614 - -
Bva09g00877 1051 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 615 1044 - -
Bva09g00877 1051 Gene3D Ribonuclease Inhibitor 369 676 IPR032675 -
Bva09g00877 1051 PRINTS Leucine-rich repeat signature 603 616 - -
Bva09g00877 1051 PRINTS Leucine-rich repeat signature 132 145 - -
Bva09g00877 1051 SUPERFAMILY L domain-like 549 678 - -
Bva09g00877 1051 Gene3D Phosphorylase Kinase; domain 1 737 845 - -
Bva09g00877 1051 Pfam Protein kinase domain 771 1038 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00877 1051 ProSiteProfiles Protein kinase domain profile. 770 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00877 1051 PANTHER PHYTOSULFOKINE RECEPTOR 2 173 282 - -
Bva09g00877 1051 SMART serkin_6 770 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00877 1051 Pfam Leucine Rich Repeat 469 488 IPR001611 GO:0005515
Bva09g00877 1051 Gene3D Transferase(Phosphotransferase) domain 1 846 1045 - -
Bva09g00877 1051 SMART LRR_sd22_2 105 128 - -
Bva09g00877 1051 SMART LRR_sd22_2 393 411 - -
Bva09g00877 1051 SMART LRR_sd22_2 129 155 - -
Bva09g00877 1051 SMART LRR_sd22_2 321 342 - -
Bva09g00877 1051 SMART LRR_sd22_2 579 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00877 Bva-Chr9 4521154 4525499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00877 63 1037 Receptor kinase-like Gene Family AT1G55610 33.607 9.64e-157 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Bva09g00877 Pkinase 4.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00877 - - gmx:100797812 1546.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00877 09 4521154 4525499 Bva09g00877 09 4521154 4525499 ECH