Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00863 ATGATGGGTTGCCTTTGTTGCAAGCCCTCTGCTATAGAGGATAGTAAAGAGAGCCCTAAGGAGCGTTTATCAAGCAAGCCTTCATTGGATTTTCGTGCATCTAGGGCTACTTCATCAAGGAGAGAGGAAGCATATAGGGTCAAAGATAGATATGATAGTAATGATGGGAGAACCACGGTAATTGATAAGCAAGGAAATGGGTCTGTTCGATTACAAAGTGATAATTTTGAGAGGAAGAGGGAAAAGACGGAATACATGGTTGCTCAACATCTAGCGATTGGTACTATTCCAAAGGCCACAGAAGGGGAGCAGGTTGCAGCTGGGTGGCCCTCATGGCTGGCAGCAGTGGCGGGAGAGGCTATCAAGGGATGGTTGCCACGTCGTGCAGATTCCTTTGAGAAGTTGGATAAAATTGGCCAGGGAACTTACAGTAATGTTTATAGAGCTCGTGATcttgaacaaaagaaaattgttgctCTTAAAAAAGTGAGGTTTGATAATCTTGAGCCAGAGAGTGTTCGCTTTATGGCAAGGGAAATTCACATTTTGCGAAGGCTTGATCATCCTAATGTCATAAAACTGGAAGGCCTGGTTACATCAAGGATGTCATGCAGTTTATACCTTGTTTTTGAGTATATGGAGCATGACTTGGCTGGGCTTGCCTCTCATCCTGGACTGAAGTTTACAGAAGCACAGGTTAAATGTTACATGCAGCAACTTTTACATGGACTTGATCACTGCCACAGCCGTGGTGTTCTGCACAGAGATATTAAGGGTTCCAACCTATTGATTGACAACAATGGAATCTTGAAGATTGCAGACTTTGGTCTGGCAAGCTTTTTCGATCCCAATCAAGTTCAGCCACTAACAAGCCGAGTTGTCACTCTTTGGTATCGACCACCAGAGCTTTTACTTGGAGCCACTTACTATGGCACTTCTGTTGATTTATGGAGTACAGGTTGTATACTTGCTGAGCTTTATGCTGGCAAGCCGATTATGCCTGGAAGAACTGAGGTGGAACAATTACATAAGATTTTTAAACTTTGCGGTTCACCTTCTGAGGATTACTGGAGAAAATCAAAGTTACCCCATGCAACAATATTTAAGCCCCAACAGCCCTACAGGCGGTGTGTGGCGGAAACATTCAAGGACTTTCCTACGCCAGCATTAGTACTCATGGAGATCCTTTTGTCCATAGACCCTGCTGATCGTGGAACTGCAGCATCTGCCTTGAAGAGTGAGTTCTTCACTACAAAACCGCTACCTTGTGATCCTTCAAGCTTGCCGAAGTATCCTCCCAGCAAAGAATTTGATGCCAAAGTACGGGATGAAGAAGCTAGAAGACAAGGAGCAGCAGGAAGCAGGGGTCAGAGACATGACCCCGAGAGAAGAGGAGCAAGAGAATCTCGAGCTGTTCCTGCCCCTGATGCCAATGCCGAACTAGTCCTGTCAATGCAGAAGAGACAAGGTCAGCCCAATTCTAAGAGCCGGAGTGAGAAGTTTAACCCTCACCCTGAGGAGGTTGCTTCTGGATTTCCTATTGATCCACCTAGGCCATCACAAGCTGTGGAAGGAGGTGTAGAATCCCAATTACAGCAACATAAACGAGCCTCCCATTCGGGTCCACTGGCACAGCGCACTGCATGGGTGAAAGCTGGGAAGAACCAGGATGATGCTCCAAAGATATCAATGGGGGGTGATGTATCTACAGTGTCAGGCTTAGTTGCTGCAAGGAGGAGTATGTTGTCTGATGATCGCAGGGAAAGGTCTGGATCATCCCAATTTGAGGCTCCAAAACTAATAAGCAGGTTCCCAGGATCCTTCAAGGAGGCCTCTGAATCATTGATGCAACAGGATCAAAAGAACCACACACAGGACGCGATTGGTCCTCCTCAAAAGGAAGAAGGGAGAGGCAGCAATAAGGACCCAATTCTTGTTGGCTATGGATCAAAGGGTCAAAAAATCCATTATTCTGGTCCATTGCTGGTTTCATCAAGCAACATGGATCAGATGTTGAAGGACCATGATCGCCAGATTCAAGAAGTGGTTAGACGAGCACGCTTGGACAAAGCAAGGATGAGGAGGCTTCAAGCTGAAGGGAACCAGATAACCACgaattctttatttgtttctggTCGCTG 2141 0.4535 MMGCLCCKPSAIEDSKESPKERLSSKPSLDFRASRATSSRREEAYRVKDRYDSNDGRTTVIDKQGNGSVRLQSDNFERKREKTEYMVAQHLAIGTIPKATEGEQVAAGWPSWLAAVAGEAIKGWLPRRADSFEKLDKIGQGTYSNVYRARDLEQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFTEAQVKCYMQQLLHGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFFDPNQVQPLTSRVVTLWYRPPELLLGATYYGTSVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPYRRCVAETFKDFPTPALVLMEILLSIDPADRGTAASALKSEFFTTKPLPCDPSSLPKYPPSKEFDAKVRDEEARRQGAAGSRGQRHDPERRGARESRAVPAPDANAELVLSMQKRQGQPNSKSRSEKFNPHPEEVASGFPIDPPRPSQAVEGGVESQLQQHKRASHSGPLAQRTAWVKAGKNQDDAPKISMGGDVSTVSGLVAARRSMLSDDRRERSGSSQFEAPKLISRFPGSFKEASESLMQQDQKNHTQDAIGPPQKEEGRGSNKDPILVGYGSKGQKIHYSGPLLVSSSNMDQMLKDHDRQIQEVVRRARLDKARMRRLQAEGNQITTNSLFVSGR 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00863 713 MobiDBLite consensus disorder prediction 13 62 - -
Bva09g00863 713 Gene3D Phosphorylase Kinase; domain 1 119 214 - -
Bva09g00863 713 Gene3D Transferase(Phosphotransferase) domain 1 215 455 - -
Bva09g00863 713 MobiDBLite consensus disorder prediction 35 57 - -
Bva09g00863 713 ProSitePatterns Protein kinases ATP-binding region signature. 138 161 IPR017441 GO:0005524
Bva09g00863 713 Pfam Protein kinase domain 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00863 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Bva09g00863 713 MobiDBLite consensus disorder prediction 435 470 - -
Bva09g00863 713 SMART serkin_6 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00863 713 MobiDBLite consensus disorder prediction 484 498 - -
Bva09g00863 713 MobiDBLite consensus disorder prediction 580 644 - -
Bva09g00863 713 PANTHER CYCLIN-DEPENDENT KINASE 2 695 - -
Bva09g00863 713 MobiDBLite consensus disorder prediction 611 627 - -
Bva09g00863 713 MobiDBLite consensus disorder prediction 13 28 - -
Bva09g00863 713 PANTHER CELL DIVISION PROTEIN KINASE 2 695 - -
Bva09g00863 713 ProSiteProfiles Protein kinase domain profile. 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00863 713 MobiDBLite consensus disorder prediction 525 540 - -
Bva09g00863 713 MobiDBLite consensus disorder prediction 422 544 - -
Bva09g00863 713 CDD STKc_CDK9_like 132 416 - -
Bva09g00863 713 SUPERFAMILY Protein kinase-like (PK-like) 126 424 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00863 Bva-Chr9 4440677 4446501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00863 124 467 Core Cell Cycle Gene Families AT5G10270 52.222 1.75e-119 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bva09g00863 Pkinase 9.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00863 - - gmx:100792173 1238.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00863 09 4440677 4446501 Bva09g00863 09 4440677 4446501 ECH