Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva09g00853 | ATGGCCGAGCTCACAGAATTGTTCCCCATTGGCAAATTATTCGAAGCCCTACATCCTCTGTGTGAGCACACAATCACAGTACCAGATCTTCCAGCCTTCATTGTTTTCTGCATCATGGTCGTGTTCTTCTTCCACCTCTGCTACAACATTTTCCGAGGTTTATTCTTCTGGTGCATCAGAAATGAAATTGTGCAGGAAGATCTTGAACCAGGAATCCATCCAGCTTATCCTTCTACGAGCCGGCCTCTGGCACTTCGATATCTCATGGAGAACAGTCTGCATGCATGGAGAATCGTTGGAGGGTTAGAACGAGAGTTCGAGGTGAAACGAGGGCAGAGGCTGAGAGGTTCAAAGAAATTGCCTCCTCTGGTTAGCTATGGAAGCCATGAAGAAGTGGGAAGAAGCTCTGATGACTGTGCTATTTGCTTGGAGGATTTCAGAGTTGGTGAATTCTGTCAAGTTTTTCCAGAGTGCAGAcacatttttcattcaaattgCTTAGATTTCTGGTTACAGCTGAATCTAACGTGCCCATTGTGTCGGAGCTCCATAGAAGAATA | 560 | 0.4446 | MAELTELFPIGKLFEALHPLCEHTITVPDLPAFIVFCIMVVFFFHLCYNIFRGLFFWCIRNEIVQEDLEPGIHPAYPSTSRPLALRYLMENSLHAWRIVGGLEREFEVKRGQRLRGSKKLPPLVSYGSHEEVGRSSDDCAICLEDFRVGEFCQVFPECRHIFHSNCLDFWLQLNLTCPLCRSSIEE | 186 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva09g00853 | 186 | SMART | ring_2 | 139 | 180 | IPR001841 | - | |
Bva09g00853 | 186 | ProSiteProfiles | Zinc finger RING-type profile. | 139 | 181 | IPR001841 | - | |
Bva09g00853 | 186 | PANTHER | RING FINGER DOMAIN-CONTAINING | 19 | 184 | - | - | |
Bva09g00853 | 186 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 19 | 184 | - | - | |
Bva09g00853 | 186 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 105 | 185 | IPR013083 | - | |
Bva09g00853 | 186 | Pfam | Ring finger domain | 137 | 181 | IPR001841 | - | |
Bva09g00853 | 186 | SUPERFAMILY | RING/U-box | 130 | 184 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva09g00853 | Bva-Chr9 | 4407645 | 4408205 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva09g00853 | 25 | 186 | C3H Transcription Factor Family | AT1G53010 | 34.286 | 9.96e-19 | 77.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva09g00853 | - | - | gmx:102660073 | 185.267 |