Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00835 ATGAGCAAAAAGGGGGACGAAGAAGACGAAGAGGAGTGCTTCTACGAGTCCCACGACCGCCTTGTATCGTCGTCTTGTTCCTGTTCCACTTCCAACTCCGACGACGAGAACGACTCCAATTCCAACTCTCCTTCTCCGAATTATGGTTCGGAACAACTGTTCTTGGTGCCCAAATTCCCAGTTGCCATGTGCAGGTACGATATATGGATCACCGAACCCTCCTCGGTGTCCGAACGCAGGACCCGGCTCCTTTGCGAGATGGGTCTTAGCTGTGACCCATCATTGTCCCGAGGGAAGCCTGCTTCCGCCGGTGATCTTAAAGAAGTGGGCAATGGAGAGTTTGGCCGATCGGTATCGTCTGATCACTTGACAGGGCAACAACCGGGTGAGAGTTCAGGTGGTCCCGCCGCCATGCTCCGATCGAAATCCGACGGGGCGGCGGATCACTGCGACGTTTCATTGTGTGTTCAGTCTCATGATCGCTGTAATaagttttcttcctcttcttcttcgtgTTTTTGTTCgtcttcttcaattctttctaTTCATTCGGTCGCACCAGAGACCGGCTCATTTGTAAATAACCGTAATCATGTTGTTAAGTCAAAGTGTGGTAATGGCAATGGACCCCTAGTTGCTACCGCCGCTTCCCCCAATAAGCCCCCTTCGGGGAAAAATTGTAGAAGGATGGATGAAATTCGAAGTGTGAGTGTGGATTTCGGTCATAGTTCGGTGGTGCCAATTTCCGATAATGCAGGTCCTGGAGAGGTGGAGGAGGTTCTTGAGTGTAATGGGCACAAGGTCAATGAACAAGTCTGCACAATAAGAGATCTTGACAATGGAAAAGAGTTTGTCGTGAATGAGATTAGGGAAGATGGCATGTGGAACAAACTCAAGGAAGTGGGGACTGGAAGGCAATTGACCATGGAGGAATTTGAGATGACAGTTGGGCACTCACCAATTGTTCAAGAATTAATGCGACGGCAAAACGTGGAGGAGGGTAATAAAGACAGTGTAGATTCAAATGCAAATGGTGGTAGTGGAGGTAGTTCCAAGCACAAGAAGAAAGGGAGTTGGTTGAAGAGTATAAGGAGTGTAGCAAGCACTATTACAGGTCATAAAGAGAGACGTAGTAGTGATGAAAGGGATACCTCCTCAGAGAAGGGTGGGCGGAGGTCAAGCTCTGCCACAGATGATAGCCAGGATGCCTCTTTTCACGGGGCTGAGAGAGTAAGGGTTAAGCAGTATGGGAAATCCAACAAAGAGGTTACAGCACTCTTTAAAAGCCAGGAGATACAGGCTCATAATGGATCCATTTGGAGCATTAGGTTTAGTTTGGATGGAAAATATCTTGCTAGTGCAGGTGAGGATTGTGTAATTCATATCTGGCAAGTTGTGGAGTCAGAGAGGAAGGGGGAGCTGCTAATGGAGAAACCAGAAGATGGGAATATGAATATGTTGTTTGTTATGAATGGATCACCAGAACCAACTCTGCTATCCCCTATAGTGGACAGCCATCctgagaagaagagaaggggGAAGTCATCCATAAGTAGAAAATCTTTGAGCTTGGACCAATTACTGGTGCCAGAAACTATATTTGGACTTGCAGAAATACCCATTTGTTCATTCCAAGGCCATCTAGATGATGTGCTTGACCTCTCTTGGTCCAAGTCTCAGCACTTGCTCTCATCCTCAATGGACAAAACAGTGCGGCTATGGCACTTATCTACCAAGTCTTGCTTGAAAGTCTTCTCACACAGTGACTATGTAACTTGCATCCAGTTTAATCCTGTTGATGATAGATACTTCATTAGCGGATCTTTGGATGCTAAGGTTCGCATATGGAGCATTCCTGATCGTCAAGTTGTCGATTGGACTGATTTACACGAGATGGTGACTGCTGCTTGTTACACACCTGATGGTCAGGGAGCACTAGTGGGTTCATACAAGGGTAGCTGCCATTTATATGATACATCTGAGAATAAGTTGCAACAGAAAAGTCAGATCAATCTgcagaacaagaaaaagaagtccCATCACAAGAAAATTACTGGGTTCCAGTTTGCCCCAGGAAGTTCATCAGAAGTACTCATCACTTCTGCGGATTCACGTATTAGGGTTGTTGATGGTGTTGATCTGGTTCATAAGTTCAAagGACTTCGTAACCCAAACAGCCAAATCTCGGCCTCCCTGACAACAAATGGTAAATACATTGTCTCAGCAAGCGAAGATTCCCATGTGTACATATGGAAAAACGAAGCCGATTGCAGGCCCAACAGAAGCAAAGGTGTCACTGTTACACAATCATATGAATATTTTCACTGTAAGGATGTTTCAGTGGCCATTCCTTGGCCTGGCATGGGTGATACATGGGGAACCCATGATACTTTATCTGGAGAACAAACTGGAGATGACAATAACCTGGATGAGATCTCATCAGCCAATCATCCTCCTACTCCGGTAGAGGAAAATTTCGGCACAGACGGTTCTCGATCTGCGTCTGGCTGCAACAATAGCCCGCTTCATGCAACCATTGCCAGCACCACAAACAGTTACTTTTTCGATCGAATATCAGCGACATGGCCAGAGGAAAAGCTTCTTGTGGCAGCAAGGAATCGAAGTCCTCGAGTAAGCATGGATATTTCTTCTGGGTTAAGTCAAAACATGTCAGCTTGGGGTATGGTCATTGTAACTGCTGGCCTAAGAGGGGAAATTagaacttttcaaaattttggattaCCACTCAGGATATA 2756 0.4441 MSKKGDEEDEEECFYESHDRLVSSSCSCSTSNSDDENDSNSNSPSPNYGSEQLFLVPKFPVAMCRYDIWITEPSSVSERRTRLLCEMGLSCDPSLSRGKPASAGDLKEVGNGEFGRSVSSDHLTGQQPGESSGGPAAMLRSKSDGAADHCDVSLCVQSHDRCNKFSSSSSSCFCSSSSILSIHSVAPETGSFVNNRNHVVKSKCGNGNGPLVATAASPNKPPSGKNCRRMDEIRSVSVDFGHSSVVPISDNAGPGEVEEVLECNGHKVNEQVCTIRDLDNGKEFVVNEIREDGMWNKLKEVGTGRQLTMEEFEMTVGHSPIVQELMRRQNVEEGNKDSVDSNANGGSGGSSKHKKKGSWLKSIRSVASTITGHKERRSSDERDTSSEKGGRRSSSATDDSQDASFHGAERVRVKQYGKSNKEVTALFKSQEIQAHNGSIWSIRFSLDGKYLASAGEDCVIHIWQVVESERKGELLMEKPEDGNMNMLFVMNGSPEPTLLSPIVDSHPEKKRRGKSSISRKSLSLDQLLVPETIFGLAEIPICSFQGHLDDVLDLSWSKSQHLLSSSMDKTVRLWHLSTKSCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRIWSIPDRQVVDWTDLHEMVTAACYTPDGQGALVGSYKGSCHLYDTSENKLQQKSQINLQNKKKKSHHKKITGFQFAPGSSSEVLITSADSRIRVVDGVDLVHKFKGLRNPNSQISASLTTNGKYIVSASEDSHVYIWKNEADCRPNRSKGVTVTQSYEYFHCKDVSVAIPWPGMGDTWGTHDTLSGEQTGDDNNLDEISSANHPPTPVEENFGTDGSRSASGCNNSPLHATIASTTNSYFFDRISATWPEEKLLVAARNRSPRVSMDISSGLSQNMSAWGMVIVTAGLRGEIRTFQNFGLPLRI 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00835 918 MobiDBLite consensus disorder prediction 117 131 - -
Bva09g00835 918 Gene3D - 527 774 IPR015943 GO:0005515
Bva09g00835 918 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 432 465 - -
Bva09g00835 918 MobiDBLite consensus disorder prediction 332 413 - -
Bva09g00835 918 SUPERFAMILY WD40 repeat-like 429 753 IPR036322 GO:0005515
Bva09g00835 918 MobiDBLite consensus disorder prediction 20 49 - -
Bva09g00835 918 MobiDBLite consensus disorder prediction 336 351 - -
Bva09g00835 918 PRINTS G protein beta WD-40 repeat signature 604 618 IPR020472 -
Bva09g00835 918 PRINTS G protein beta WD-40 repeat signature 562 576 IPR020472 -
Bva09g00835 918 PRINTS G protein beta WD-40 repeat signature 451 465 IPR020472 -
Bva09g00835 918 ProSiteProfiles Trp-Asp (WD) repeats profile. 544 584 IPR001680 GO:0005515
Bva09g00835 918 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN-RELATED 5 918 - -
Bva09g00835 918 Pfam WD domain, G-beta repeat 540 574 IPR001680 GO:0005515
Bva09g00835 918 Pfam WD domain, G-beta repeat 580 617 IPR001680 GO:0005515
Bva09g00835 918 Pfam WD domain, G-beta repeat 431 463 IPR001680 GO:0005515
Bva09g00835 918 MobiDBLite consensus disorder prediction 94 142 - -
Bva09g00835 918 SMART WD40_4 425 464 IPR001680 GO:0005515
Bva09g00835 918 SMART WD40_4 578 617 IPR001680 GO:0005515
Bva09g00835 918 SMART WD40_4 665 710 IPR001680 GO:0005515
Bva09g00835 918 SMART WD40_4 537 575 IPR001680 GO:0005515
Bva09g00835 918 SMART WD40_4 711 752 IPR001680 GO:0005515
Bva09g00835 918 SMART WD40_4 620 658 IPR001680 GO:0005515
Bva09g00835 918 MobiDBLite consensus disorder prediction 792 837 - -
Bva09g00835 918 ProSiteProfiles Trp-Asp (WD) repeats profile. 432 473 IPR001680 GO:0005515
Bva09g00835 918 MobiDBLite consensus disorder prediction 1 49 - -
Bva09g00835 918 MobiDBLite consensus disorder prediction 795 837 - -
Bva09g00835 918 PANTHER WD REPEAT DOMAIN 44 5 918 IPR040324 -
Bva09g00835 918 Gene3D - 365 496 IPR015943 GO:0005515
Bva09g00835 918 ProSiteProfiles Trp-Asp (WD) repeats profile. 584 618 IPR001680 GO:0005515
Bva09g00835 918 MobiDBLite consensus disorder prediction 370 395 - -
Bva09g00835 918 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 544 578 - -
Bva09g00835 918 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 584 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00835 Bva-Chr9 4322563 4328558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00835 541 749 U-box Gene Family AT1G04510 26.009 4.27e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00835 K20241 - zju:107432447 1254.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00835 09 4322563 4328558 Bva09g00835 09 4322563 4328558 ECH