Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00829 ATGGGAGTTCCCGAGACTGACCCGTTAGCCCAATTGAGTTTGCCTCCGGGTTTTCGGTTTTACCCGACGGACGAGGAGCTTCTGGTTCAGTACCTTTGCAGGAAGGTAGCTGGGCACCATTTCTCTCTGCAAATCATTGCTGAAATCGATTTGTACAAGTTCGATGCATGGCTTCTACCAAGCAAAGCCATATTTGGTGAAAAAGAATGGTACTTTTTCAGCCCAAGAGAGCGAAAATACCCGAATGGTTCTCGACCCAACAGAGTTGCCGGGTCTGGGTACTGGAAAGCCACCGGCACTGATAAAGTTATCACCACTGAAGGAAGAAAAGTTGGTATAAAAAAGGCTCTTGTTTTCTACGTTGGGAAAGCACCCAAAGGAACCAAAACCAATTGGATTATGCACGAGTATCGTCTCCTTGATTCTTCCCGCAAAGGCGGTAGCTCCAGGTTGGATGATTGGGTTCTGTGTCGGATATACAAGAAGAATTCGAGTGCCCAGAAGGCTGTTACAAGTGTTTCAAGCAATGAATATAGCTACGGTTCTTCTTCATCTACGTCGTCCCACCTTGACGACGTGCTCGAATCATTGCCGGAAATTGACGACCGGTGCTTTGCGCTGCCGCGTGTGAACTCGCTCAAAACGTTTCAGCAAGATGAGAAGGTCAATTTTCAGAATCTGGGTATTGGGAATTTCGTGGATTGGGCTAACCCTGCAGTGCTGAACTCGGTGGCGGATTTCGTTTCCGGGAATCAATCACAGAGCCAAAGTCAGGGGATGCTGAACTACAATACTGGTACGGGCAGTGACCTTTACGTGCCTTCTATGCCGTCGCTAATGGAGGAAGAGGTTCAAAGCGGAGTGAGGAGTCAACGGGTCGACAATTCCGGGTTATACCAGCAGAATTCAAATGTGTTTACACAGGGATTCTCGAACTCCATTGATCCGTATGGATTCAGATACCCGACTCAGCAAGTCGGATTCGGGTACAGGCAATG 998 0.482 MGVPETDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIAEIDLYKFDAWLLPSKAIFGEKEWYFFSPRERKYPNGSRPNRVAGSGYWKATGTDKVITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDSSRKGGSSRLDDWVLCRIYKKNSSAQKAVTSVSSNEYSYGSSSSTSSHLDDVLESLPEIDDRCFALPRVNSLKTFQQDEKVNFQNLGIGNFVDWANPAVLNSVADFVSGNQSQSQSQGMLNYNTGTGSDLYVPSMPSLMEEEVQSGVRSQRVDNSGLYQQNSNVFTQGFSNSIDPYGFRYPTQQVGFGYRQ 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00829 332 Gene3D NAC domain 23 168 IPR036093 GO:0003677|GO:0006355
Bva09g00829 332 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Bva09g00829 332 PANTHER NAC TRANSCRIPTION FACTOR 56 1 311 - -
Bva09g00829 332 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Bva09g00829 332 PANTHER NAC DOMAIN-CONTAINING PROTEIN 55 1 311 - -
Bva09g00829 332 SUPERFAMILY NAC domain 10 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00829 Bva-Chr9 4284620 4286273 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00829 1 320 NAC Transcription Factor Family AT4G27410 58.358 9.34e-121 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva09g00829 NAM 2.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00829 - - qsu:112022199 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00829 09 4284620 4286273 Bva09g00829 09 4284620 4286273 ECH