Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00809 ATGAACGAGAAGGCTAACGTTTCCAAAGAGCTCAACGCCAAGCACAAAAAGATACTGGAAGGACTTCTTAAATTGCCAGAAAATAGGGAATGTGCTGACTGTAAAGCTAAGGGGCCAAGATGGGCTAGTGTGAACCTGGGCATCTTTATATGCATGCAGTGTTCAGGAATACACCGAAGTCTTGGGGTTCATATATCAAAGGTTCGGTCTGCAACATTGGACACATGGCTTCCAGAGCAGGTTGCATTCATTCAATCAATGGGAAATGAAAAAGCAAACAGTTATTGGGAGGCAGAGTTACCACCAAATTACGACAGAGTTGGAATTGAGAATTTCATTCGTGCAAAgtaTGAAGATAAGAGATGGGTCCCAAGGGATGGAAAACCACAATCACCTTCTAGACTGCGGGAGGACAAGGGTTCTTTGCATCGGCAAAGGCCAGCAGAAAGAAGTGGGTATGGGTATGCATCTGTTTCTGAGAATACATTtgaggaaaggaagaaagttcAACCATCAAATACTGTTCCTGCTACAAGAATTAGTGTTCCTGCTCCTCCCAAAGGACCTGACCAGGTAACTCCTATAAAACCGCAGCATGTTGAGAAAGTTGAACCAGTGGCACCACAACCACAAGCAGAAACAACAAAGCAACCAACTGAAACAACTAGTATCCCTCCAAAAGTTGATTATGCTACGGACCTTTTCAACATGTTGTCCATGGATGGCCCAAGTGAAAACGGCTCAGAGACAACTAGTGCTGATGATAATAACTGGGCTGGTTTCCAGTCTGCAGCTGCGACAGAACCATCGACAGCTGAGAAGACTGGTCCAATAAAAGCAGTTGAAAGTACTCCCCAGCCTGCTTCTGGGATTGAGGATTTATTTAAAGATTCACCTTCAGTGACTCCAAGCTTAGTTCCAGAAAAACCAcaaaaagatgtaaaaaatGATATCATGAGCCTCTTTGAGAAGTCAAGTATGGTGTCTCCATTTGCTATGCATCAACAGCAGCTTGCTATGCTGGCACAGCAACAGTCCCTTTTAATGGTAGCTGCTGCTAAATCTGCTGGTGGGGACCCAAAGTCCATCTTGGCACAGCAACAGTCCCTTCTAATGGCTGCTGCAGCTAAATCTGCTGGTGGGGACCCCAAATTTCCTCTTAGTGCACAACAGCCTGGATTGAATGGATCCATTCCTGTCCAAAGTTGGCCAACAGCTGGCTACCCTATTCCTGGAGTAATGCCCATGGGTGGTCAGGGAGATTTGCAAAAACTCATGAAGGCTACGAACATTGGCCCAGCAAATCAAATGGGAAGCTCTTCTGTTCAGCATCCATCATCTGGTTTCTATACAATGGGACAAGTTTCTTCAGCTAATGGTATGATGACGGCTGGCGTGAATAAACCTCAGTCAACAGCTCCAGTGTCATCAACTTCTTCACAGACAGGGTCAGGGAAGGATTATGATTTTTCCTCTTTAACACAAGGGATGTTTACGAAACACTG 1505 0.4412 MNEKANVSKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEDKRWVPRDGKPQSPSRLREDKGSLHRQRPAERSGYGYASVSENTFEERKKVQPSNTVPATRISVPAPPKGPDQVTPIKPQHVEKVEPVAPQPQAETTKQPTETTSIPPKVDYATDLFNMLSMDGPSENGSETTSADDNNWAGFQSAAATEPSTAEKTGPIKAVESTPQPASGIEDLFKDSPSVTPSLVPEKPQKDVKNDIMSLFEKSSMVSPFAMHQQQLAMLAQQQSLLMVAAAKSAGGDPKSILAQQQSLLMAAAAKSAGGDPKFPLSAQQPGLNGSIPVQSWPTAGYPIPGVMPMGGQGDLQKLMKATNIGPANQMGSSSVQHPSSGFYTMGQVSSANGMMTAGVNKPQSTAPVSSTSSQTGSGKDYDFSSLTQGMFTKH 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00809 501 CDD ArfGap 19 117 - -
Bva09g00809 501 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Bva09g00809 501 MobiDBLite consensus disorder prediction 123 146 - -
Bva09g00809 501 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Bva09g00809 501 MobiDBLite consensus disorder prediction 210 226 - -
Bva09g00809 501 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 361 IPR044520 GO:0005096
Bva09g00809 501 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 362 500 IPR044520 GO:0005096
Bva09g00809 501 MobiDBLite consensus disorder prediction 264 286 - -
Bva09g00809 501 Gene3D Arf GTPase activating protein 1 129 IPR038508 -
Bva09g00809 501 PANTHER ARF GTPASE ACTIVATOR 1 361 - -
Bva09g00809 501 PANTHER ARF GTPASE ACTIVATOR 362 500 - -
Bva09g00809 501 Pfam Putative GTPase activating protein for Arf 17 123 IPR001164 GO:0005096
Bva09g00809 501 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Bva09g00809 501 MobiDBLite consensus disorder prediction 123 226 - -
Bva09g00809 501 MobiDBLite consensus disorder prediction 463 501 - -
Bva09g00809 501 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Bva09g00809 501 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Bva09g00809 501 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00809 Bva-Chr9 4156319 4161342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00809 16 118 C2H2 Transcription Factor Family AT4G05330 51.351 7.37e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00809 K12486 - gmx:100807561 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00809 09 4156319 4161342 Bva09g00809 09 4156319 4161342 ECH