Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00801 ATGCTTGCTTTATCCTCTACCTTGTTTTCAACGAACGCAGATGCATTATTCACAGATCAGGATCCCATCAACTATGACCAAGACTACATGCAGAAATCATTTGttcattttccttcaactGATCATCCAAATTTTGAGCACAGAGACTCTCCGGTAAATGATGCTGACCTTGTTAAGGTCAAGAAACTCAACCATAATGCTGGCGAGCGTGATCGccggaagaaaatgaataatttattttcttctctccgTTCACTGCTTCCAGCCAATCACCAAGTACAGaaaaacctAAGCAACCCGGCTGTAGTTTCGCGCGTGCTTGAGTACATTCCACAGCTGCAACAGCAACTGAGGGAACTAATTCAAAAGAAGGAAGAGCTTTTGTATAGGATTGCAAGTCAACGTGAACAGAATTATCCAAAGAAGCAGGAAACATGCACATATGAGAGCTCCTTGCCTGTTATTTCGTCAAGTCAGCTTAATGACACAGAAATTTTGGTTCAGATATCTACACACAAGATACATAGGAGTCTGCTATCTGAGACTTTACTCAGTTTAGAATATAATGGCCTCTCTCTGCTTgatgcttcttcttttcagtCTTCCGGGGACATGATTTTCTACTCTTTGCATTTTGAGGTGCAGAAAAATGATAGACTGAGAAGCTG 668 0.3713 MLALSSTLFSTNADALFTDQDPINYDQDYMQKSFVHFPSTDHPNFEHRDSPVNDADLVKVKKLNHNAGERDRRKKMNNLFSSLRSLLPANHQVQKNLSNPAVVSRVLEYIPQLQQQLRELIQKKEELLYRIASQREQNYPKKQETCTYESSLPVISSSQLNDTEILVQISTHKIHRSLLSETLLSLEYNGLSLLDASSFQSSGDMIFYSLHFEVQKNDRLRS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00801 222 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 217 IPR015660 GO:0003700|GO:0006357
Bva09g00801 222 Pfam Helix-loop-helix DNA-binding domain 61 114 IPR011598 GO:0046983
Bva09g00801 222 PANTHER TRANSCRIPTION FACTOR ORG2-RELATED 1 217 - -
Bva09g00801 222 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 60 113 IPR011598 GO:0046983
Bva09g00801 222 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 61 134 IPR036638 GO:0046983
Bva09g00801 222 SMART finulus 66 119 IPR011598 GO:0046983
Bva09g00801 222 Coils Coil 110 137 - -
Bva09g00801 222 Gene3D - 56 146 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00801 Bva-Chr9 4115435 4116435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00801 54 218 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 50.909 2.71e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva09g00801 HLH 2.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00801 - - vvi:100262373 185.652