Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00800 ATGGCCACCATAGATCAGGACAACTCACGTGCTTCACGCATGCACTACTACACCACAGACAGCGACGAGGAATCAGACCACGTCAACAGCGACGAAGATGAGGATAACCAAGACgatgaagaaggagaagaaaataaaaaggctgACAAGGCCTTTGGATGCTGGCCAACCACAGGTCTCAACAGTTTCTGCGGTCCACGGCGGTCGGGTTTGGGCTTCTCTATGGGGAAGGTGTTGGACCCGAGAGCGAAATGGGTCGAAGAATGGAACAGGGTGTTTCTGCTGGTATGTGCAACCGGGTTGTTTGTGGACCCACTCTTCTTCTACGCGCTCTCCATAAGCGACACGTGTATGTGCCTCTTCGTGGACGGGTGGTTCGCCATCACGGTGACGGTGCTCCGGTGCATGACGGATGTGCTGCACGTGTGGAATATGTGGTTGCAGCTCAAAATGGCCAGACGCTCGTTTGGCGTGGGTGGTGGAAACAATGGGCTCAGAGACACCAGCCCTCGCTCAGTGGCTCTTCACTATCTGAAGACTAAGAGGGGATTCTTCTTTGACCTCTTTATCATTCTTCCTCTACCCCAGaTTGTTCTGTGGGTCGCAATTCCCCAGCTGTTGGAGAAGGGTTCAGTTACACTGGTGATGACGGTATTGTTAATTATGTTCTTGTTCCAATATCTTCCCAAGATCTATCACTCCGTTTGCCTCCTGCGTCGCATGCAGAACCTCTCTGGCTACATTTTTGGAACTGTTTGGTGGGGAATCGCCCTTAACATGATCGTATATTTTGTTGCGTCCCATGCAGCAGGGGCGTGTTGGTACTTGCTAGGGATTCAAAGAGCAACCAAGTGCTTGAAGGAGCAGTGTGGGAAAACAACTAGTTGTGGCCTAAGAATGCTGTCTTGTAAAGAACCCATTTATTATGGAACAAGTAGCATGGTGAGGGACACAGCAAGACTGGCATGGGCAGAGAACAAGCAAGCTAGGTCTACGTGCTTAGATAGCTCGGAGAATTATGACTATGGAGCTTATAAGTGGACTGTTCAACTTCTCACAAATGATAGTCGCTTGGAAAAGATTCTTTTCCCTATCTTCTGGGGCCTAATGACTCTTAGCACCTTTGGGAACCTTGAGAGCACAACGGAATGGCTAGAAGTGGTATTTAATATCATTGTCTTGACCAGTGGGCTCCTTCTAGTGACAATGCTGATTGGTAACATCAAGGTGTTTCTGCATGCAACAACGTCAAAGAAGCAAGCAATGCAATTGAAGATGAGGAACATTGAATGGTGGATGAGGAAAAGGCAATTGCCTCAAGGGTTCCGTCAGCGGGTGCGAAACTATGAACGGCAGCGGTGGGCCGCCATGCGCGGTGTCGATGAATGTGATGTGATCAGAAATCTCCCCGAAGGACTGAGGAGGGACATCAAGTACCATCTCTGTTTGGATTTGGTCAGACAGGTGCCACTATTTCAACACATGGATGATCTGGTCCTAGAGAACATCTGCGATCGTGTGAAGTCACTCATATTCACAAAGGGAGAAACGATAACGAGAGAAGGAGACCCTGTTCAAAGAATGCTATTTGTAGTAAGGGGCCACCTTCAGAGTAGCCAATTGCTTCGAGATGGCGTGAAGAGTTGCTGCATGTTAGGCCCTGGAAACTTCAGTGGCGATGAGCTGCTTTCGTGGTGTTTAAGGAGACCCTTTATAGAGCGGCTTCCGCCGTCCTCATCAACCTTGGTCACGCTTGAAACCACAGAGGTATTTGGACTTGAAGCAGAGGACGTTAAGTACGTGACTCAACATTTCAGATACACATTTGTGAATGAAAAGGTTAAGAGAAGCGCCAGGTATTACTCACCTGGGTGGAGAACGTGGGCTGCTGTGGCCATTCAATTGGCTTGGAGAAGATATAAGCACAGGTTAACCTTAGCTTCTTTGTCCTTTATAAGGCCAAGGAGGCCTGTGTCAAGGTGCTCTTCCATGGGAGAGGACAGGCTTCGTCTCTATACTGCTTTGTTAACTTCACCAAAGCCTAATCAGGatgattttgacttttg 2066 0.4768 MATIDQDNSRASRMHYYTTDSDEESDHVNSDEDEDNQDDEEGEENKKADKAFGCWPTTGLNSFCGPRRSGLGFSMGKVLDPRAKWVEEWNRVFLLVCATGLFVDPLFFYALSISDTCMCLFVDGWFAITVTVLRCMTDVLHVWNMWLQLKMARRSFGVGGGNNGLRDTSPRSVALHYLKTKRGFFFDLFIILPLPQIVLWVAIPQLLEKGSVTLVMTVLLIMFLFQYLPKIYHSVCLLRRMQNLSGYIFGTVWWGIALNMIVYFVASHAAGACWYLLGIQRATKCLKEQCGKTTSCGLRMLSCKEPIYYGTSSMVRDTARLAWAENKQARSTCLDSSENYDYGAYKWTVQLLTNDSRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRQLPQGFRQRVRNYERQRWAAMRGVDECDVIRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQLLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLVTLETTEVFGLEAEDVKYVTQHFRYTFVNEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLASLSFIRPRRPVSRCSSMGEDRLRLYTALLTSPKPNQDDFDF 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00800 688 CDD CAP_ED 491 597 IPR000595 -
Bva09g00800 688 Gene3D Helix hairpin bin 416 482 - -
Bva09g00800 688 SUPERFAMILY Voltage-gated potassium channels 85 412 - -
Bva09g00800 688 MobiDBLite consensus disorder prediction 1 15 - -
Bva09g00800 688 MobiDBLite consensus disorder prediction 1 48 - -
Bva09g00800 688 ProSiteProfiles cAMP/cGMP binding motif profile. 491 601 IPR000595 -
Bva09g00800 688 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 9 685 - -
Bva09g00800 688 MobiDBLite consensus disorder prediction 25 42 - -
Bva09g00800 688 SUPERFAMILY cAMP-binding domain-like 417 605 IPR018490 -
Bva09g00800 688 Gene3D Jelly Rolls 489 607 IPR014710 -
Bva09g00800 688 Pfam Cyclic nucleotide-binding domain 512 599 IPR000595 -
Bva09g00800 688 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 9 685 - -
Bva09g00800 688 Pfam Ion transport protein 89 408 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00800 Bva-Chr9 4103649 4110366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00800 56 687 Ion Channels AT5G54250 79.969 0.0 1050
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00800 K05391 - zju:107430493 1171.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00800 09 4103649 4110366 Bva09g00800 09 4103649 4110366 ECH