Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00792 ATGGAGAAATCTCCTTCTCGTGAAAAGAATAACGGGTTGAAAAAAGGTCCATGGACTCCAGAGGAAGATCGGAAACTAATCGATTATATTCAAAAGCATGGACACTGCAAATGGCGAACTCTTCCCAAGAATGCAGGACTCAAACGATGTGGAAAGAGTTGCCGGCTTCGCTGGGCAAACTATTTGCGGCCAGATATAAAAAGAGGGCGGTTCTcatttgaagaagaagaagccatCATCCAGTTACACAGCGTTTTGGGAAACAAGTGGTCTACAATTGCTGCTAGCTTGCCGGGAAGAACAGATAATGAGATCAAAAACTATTGGAATACTCACATCAAGAAGAGGCTACTGAAGATGGGAATTGATCCAGTGACTCACACCCCATGCCTTGATCTTCTACAACTCTCCTCAATTTTGAACCCGTCTTTGTGCACTTCACCCCAGCTCAATTATTCTGGTCTGCTTGGGATGGCAAGCATGCTAAATCCGAATCTTCTAAGTTTTCTCACAACTTTGTTATCATCTCAAAGCAAAAACCCAGatactataaatacaaatCAACTTTTGCAGCAAAACCAACTTCCCCAAGTGCAAAACCAACCCCAGTACTGTTCCCAACCAATGCAGCTTAACTCAGTTCAAGCTTTCCAACCTAACCAGCTCCAAGACCCTATTCAAGATTCCCCAGCTTGTGCAACACCTAATACTTCCATACCCAATTTATGGCAATATAATGGAGGTCAATTAGAACAGCAACCAGATCAATCCCAAACACACAACTTTTCTTTACCAAAACTCAATTCCATGATCAACAATCTCTTGAAAAATCAAGTGTCACAGTCTCAAAACAGTtccacttttaatttaaatgcaCTGCTACATTCCACTGCCTCATCTTTTTGCCCTAGTACTTTGAATTCATCATCTTCCACGACATTTGTCAATGGAGCCACTGAAGATGAAAGAGACACTTATTGCAGCAATATGCTGATGTACAATATCTCAAATGGTTTGAATGACAGCGGACTTTTGTG 1037 0.3983 MEKSPSREKNNGLKKGPWTPEEDRKLIDYIQKHGHCKWRTLPKNAGLKRCGKSCRLRWANYLRPDIKRGRFSFEEEEAIIQLHSVLGNKWSTIAASLPGRTDNEIKNYWNTHIKKRLLKMGIDPVTHTPCLDLLQLSSILNPSLCTSPQLNYSGLLGMASMLNPNLLSFLTTLLSSQSKNPDTINTNQLLQQNQLPQVQNQPQYCSQPMQLNSVQAFQPNQLQDPIQDSPACATPNTSIPNLWQYNGGQLEQQPDQSQTHNFSLPKLNSMINNLLKNQVSQSQNSSTFNLNALLHSTASSFCPSTLNSSSSTTFVNGATEDERDTYCSNMLMYNISNGLNDSGLL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00792 345 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Bva09g00792 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bva09g00792 345 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 334 - -
Bva09g00792 345 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Bva09g00792 345 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Bva09g00792 345 Gene3D - 70 117 - -
Bva09g00792 345 Gene3D - 7 67 - -
Bva09g00792 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Bva09g00792 345 SMART sant 67 115 IPR001005 -
Bva09g00792 345 SMART sant 14 64 IPR001005 -
Bva09g00792 345 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bva09g00792 345 CDD SANT 70 113 IPR001005 -
Bva09g00792 345 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Bva09g00792 345 CDD SANT 17 62 IPR001005 -
Bva09g00792 345 PANTHER TRANSCRIPTION FACTOR MYB30-LIKE 1 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00792 Bva-Chr9 4077804 4079124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00792 1 345 MYB Transcription Factor Family AT4G21440 47.500 2.26e-89 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva09g00792 Myb_DNA-binding 3.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00792 K09422 - gmx:100820398 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00792 09 4077804 4079124 Bva09g00792 09 4077804 4079124 ECH